RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 IGKV3-20P01619 116 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 PAX9P55771 341 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 PRCDQ00LT1 54 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 ITLN1Q8WWA0 313 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 SAA2-SAA4A0A096LPE2 208 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 A0A0B4J2C4 111 aa7.93□□□□□ -1.14
TRPM1-208ENST00000558768 CDK2AP2O75956 126 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 CCL3P10147 92 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 CCL8P80075 99 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 ZNF876PQ49A33 203 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.92□□□□□ -1.14
TRPM1-208ENST00000558768 ANAPC1Q9H1A4 1944 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 ADARB2-AS1A8MUL3 147 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 F6UB75 175 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 F8WEM9 126 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 RNASE4P34096 147 aaKnown RBP7.92□□□□□ -1.14
TRPM1-208ENST00000558768 RPL15P61313 204 aaKnown RBP7.92□□□□□ -1.14
TRPM1-208ENST00000558768 DAD1P61803 113 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 VWC2Q2TAL6 325 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 PTH2Q96A98 100 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 TRAV12-1A0A0B4J245 112 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 LMO1P25800 156 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
TRPM1-208ENST00000558768 KLF5Q13887 457 aaPredicted RBP7.92□□□□□ -1.14
TRPM1-208ENST00000558768 TMEM54Q969K7 222 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 DUX3Q96PT4 197 aa7.92□□□□□ -1.14
TRPM1-208ENST00000558768 C2CD4DB7Z1M9 353 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 B9A039 149 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 SPACA3Q8IXA5 215 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 ZNF492Q9P255 531 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 PRR33A8MZF0 331 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 Q6ZS49 121 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 A0A0U1RQV1 116 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 INS-IGF2F8WCM5 200 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 TM4SF5O14894 197 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 AGFG2O95081 481 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 INSP01308 110 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 NBL1P41271 181 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 FOXG1P55316 489 aaPredicted RBP7.91□□□□□ -1.14
TRPM1-208ENST00000558768 TMEM240Q5SV17 173 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 SPATA31B1PQ5VZV4 182 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 FAM104BQ5XKR9 115 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 FAM231DQ6ZW35 169 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 LYPD1Q8N2G4 141 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 BRWD3Q6RI45 1802 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 A4D1N5 150 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 RS1O15537 224 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 IGHG3P01860 377 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 EGR2P11161 476 aaPredicted RBP7.91□□□□□ -1.14
TRPM1-208ENST00000558768 C1orf195Q5TG92 126 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 GFRALQ6UXV0 394 aa7.91□□□□□ -1.14
TRPM1-208ENST00000558768 ZFP36L1Q07352 338 aaKnown RBP7.9□□□□□ -1.14
TRPM1-208ENST00000558768 DPH3Q96FX2 82 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 IGKV1-12A0A0C4DH73 117 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 IGKV1D-12P01611 117 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 CLPSP04118 112 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 PSMB8P28062 276 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 SHANK1Q9Y566 2161 aa7.9□□□□□ -1.14
TRPM1-208ENST00000558768 ARMS2P0C7Q2 107 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 C2orf66Q6UXQ4 117 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 DSCR8Q96T75 97 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 MRPL35Q9NZE8 188 aaKnown RBP7.9□□□□□ -1.15
TRPM1-208ENST00000558768 IGHV3-49A0A0A0MS15 119 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 hADV29S1A0JD25 119 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 C6orf226Q5I0X4 101 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 PMS2CLQ68D20 193 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 Q6ZUT4 128 aa7.9□□□□□ -1.15
TRPM1-208ENST00000558768 SPTAN1Q13813 2472 aaKnown RBP7.89□□□□□ -1.15
TRPM1-208ENST00000558768 HLA-DRB4P13762 266 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 CCL7P80098 99 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 TDRG1Q3Y452 100 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 Q8N8P6 123 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 CT55Q8WUE5 264 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 TMEM141Q96I45 108 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 HLA-DRB4X5D2U9 266 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 PKDREJQ9NTG1 2253 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 TRGV11A0A075B6L2 103 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 ETV2O00321 342 aaPredicted RBP7.89□□□□□ -1.15
TRPM1-208ENST00000558768 ZNF407Q9C0G0 2248 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 OVOL1O14753 267 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 NUPR1O60356 82 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 RSPO4Q2I0M5 234 aaPredicted RBP7.89□□□□□ -1.15
TRPM1-208ENST00000558768 KLF14Q8TD94 323 aaPredicted RBP7.89□□□□□ -1.15
TRPM1-208ENST00000558768 ZNF524Q96C55 264 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 ARFGEF3Q5TH69 2177 aa7.89□□□□□ -1.15
TRPM1-208ENST00000558768 A0A0G2JRQ6 117 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 SMKR1H3BMG3 65 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 TIMM23O14925 209 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 DUSP14O95147 198 aaKnown RBP7.88□□□□□ -1.15
TRPM1-208ENST00000558768 IL17RELQ6ZVW7 336 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 CENPVQ7Z7K6 275 aaPredicted RBP7.88□□□□□ -1.15
TRPM1-208ENST00000558768 ZNF747Q9BV97 191 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 PLA2G2FQ9BZM2 168 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 SRSF2Q01130 221 aaKnown RBP7.88□□□□□ -1.15
TRPM1-208ENST00000558768 CHCHD2P9Q5T1J5 151 aaPredicted RBP7.88□□□□□ -1.15
TRPM1-208ENST00000558768 LINC01545Q5VT33 79 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 KIF26AQ9ULI4 1882 aaPredicted RBP7.88□□□□□ -1.15
TRPM1-208ENST00000558768 TRBV25-1A0A075B6N4 114 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 IGKV1-27A0A075B6S5 117 aa7.88□□□□□ -1.15
TRPM1-208ENST00000558768 TRAV13-2A0A0B4J235 113 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms