RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 PSG8Q9UQ74 426 aa8.9□□□□□ -0.99
PCAT29-201ENST00000558411 CACNA1EQ15878 2313 aa8.9□□□□□ -0.99
PCAT29-201ENST00000558411 BDP1A6H8Y1 2624 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 MYO15AQ9UKN7 3530 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 KLRC4-KLRK1H3BQV0 150 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 H3BTX0 84 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 ATP5LO75964 103 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 APOMO95445 188 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 IGHV3-48P01763 117 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 SPINK8P0C7L1 97 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 HES3Q5TGS1 186 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 LYPD1Q8N2G4 141 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 MAFAQ8NHW3 353 aaPredicted RBP8.89□□□□□ -0.99
PCAT29-201ENST00000558411 MRPL20Q9BYC9 149 aaKnown RBP8.89□□□□□ -0.99
PCAT29-201ENST00000558411 CDIP1Q9H305 208 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 ERG28Q9UKR5 140 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 DPM2O94777 84 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 CECR9P0C854 216 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 FCER1GP30273 86 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 TWIST1Q15672 202 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 LYZL1Q6UWQ5 148 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 OR4C13Q8NGP0 309 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 VCX2Q9H322 139 aa8.89□□□□□ -0.99
PCAT29-201ENST00000558411 C16orf97H3BN30 126 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 NPYP01303 97 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 IGLV1-44P01699 117 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 CKS2P33552 79 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 MEOX1P50221 254 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 CRIP1P50238 77 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 INSL3P51460 131 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 C6orf15Q6UXA7 325 aaPredicted RBP8.88□□□□□ -0.99
PCAT29-201ENST00000558411 EXOC3-AS1Q8N2X6 119 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 C20orf78Q9BR46 151 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 TPPP3Q9BW30 176 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 PCNX2A6NKB5 2137 aa8.88□□□□□ -0.99
PCAT29-201ENST00000558411 TMEM213A2RRL7 107 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 TNFRSF1AP19438 455 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 FXYD7P58549 80 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 Q71RC1 249 aaPredicted RBP8.87□□□□□ -0.99
PCAT29-201ENST00000558411 SYT8Q8NBV8 401 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 MAP1LC3AQ9H492 121 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 TRBV19A0A075B6N1 114 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 A0A1W2PPI3 338 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 C10orf55Q5SWW7 151 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 MOGAT3Q86VF5 341 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 TTTY13Q9BZ97 58 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 NXT2Q9NPJ8 142 aaKnown RBP8.87□□□□□ -0.99
PCAT29-201ENST00000558411 SPEGQ15772 3267 aa8.87□□□□□ -0.99
PCAT29-201ENST00000558411 DNAJC13O75165 2243 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 K7EM74 188 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 IGLV2-23P01705 113 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 ZC2HC1BQ5TFG8 222 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 AMTNQ6UX39 209 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 Q6ZUT4 128 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 TMEM158Q8WZ71 300 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 SPRR3Q9UBC9 169 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 DKK4Q9UBT3 224 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 KNTC1P50748 2209 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 TRGV5A0A0B4J1U4 118 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 PRSS1P07477 247 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 LEPP41159 167 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 VMA21Q3ZAQ7 101 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 CFAP126Q5VTH2 177 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 COX8CQ7Z4L0 72 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 GTSCR1Q86UQ5 136 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 TMEM178AQ8NBL3 297 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 SCNM1Q9BWG6 230 aa8.86□□□□□ -0.99
PCAT29-201ENST00000558411 TRBV7-3A0A075B6L6 115 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 PRRG2O14669 202 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 RUSC1-AS1Q66K80 236 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 SIGLEC15Q6ZMC9 328 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 GAFA1Q96PS6 74 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 NGBQ9NPG2 151 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 PGPEP1Q9NXJ5 209 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 DSCAMO60469 2012 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 NCOR1O75376 2440 aa8.85□□□□□ -0.99
PCAT29-201ENST00000558411 LAMTOR5O43504 91 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 GATA4P43694 442 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 WFDC3Q8IUB2 231 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 MDS2Q8NDY4 140 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 DLX4Q92988 240 aaPredicted RBP8.84□□□□□ -0.99
PCAT29-201ENST00000558411 HIST1H4GQ99525 98 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 ZNRD1Q9P1U0 126 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 IGHV1-18A0A0C4DH31 117 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 TMEM8BA6NDV4 472 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 MT-ATP8P03928 68 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 LYZP61626 148 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 FAM169BQ8N8A8 192 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 RNF183Q96D59 192 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 FOXC2Q99958 501 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 DEFB127Q9H1M4 99 aa8.84□□□□□ -0.99
PCAT29-201ENST00000558411 K7ESF4 209 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 GAGE5Q13069 117 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 GAGE6Q13070 117 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 SPRNQ5BIV9 151 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 DUX4L9Q6RFH8 374 aaPredicted RBP8.83□□□□□ -1
PCAT29-201ENST00000558411 MAPKAPK5-AS1Q8N8E1 139 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 SHANK2-AS3Q9BTD1 123 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 RNF7Q9UBF6 113 aa8.83□□□□□ -1
PCAT29-201ENST00000558411 PRR14LQ5THK1 2151 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms