RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 GTSF1Q8WW33 167 aa8.23□□□□□ -1.09
TPM1-210ENST00000558264 RPP21Q9H633 154 aaKnown RBP8.23□□□□□ -1.09
TPM1-210ENST00000558264 IGHV1-69DA0A0B4J2H0 117 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 IGHV1-69P01742 117 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 C5orf56Q8N8D9 126 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 OR2D3Q8NGH3 330 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 TSKUQ8WUA8 353 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 DAZAP1Q96EP5 407 aaKnown RBP8.22□□□□□ -1.09
TPM1-210ENST00000558264 ZC2HC1AQ96GY0 325 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 CSPG4Q6UVK1 2322 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 EPG5Q9HCE0 2579 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 IGKV2-40A0A087WW87 121 aaPredicted RBP8.22□□□□□ -1.09
TPM1-210ENST00000558264 TMEM8BA6NDV4 472 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 IGKV2D-40P01614 121 aaPredicted RBP8.22□□□□□ -1.09
TPM1-210ENST00000558264 APCSP02743 223 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 COL8A1P27658 744 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 FAM110DQ8TAY7 271 aaPredicted RBP8.22□□□□□ -1.09
TPM1-210ENST00000558264 C8orf49Q96NF6 230 aa8.22□□□□□ -1.09
TPM1-210ENST00000558264 USP9YO00507 2555 aaPredicted RBP8.21□□□□□ -1.09
TPM1-210ENST00000558264 ZNF785A8K8V0 405 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 SCGB1D1O95968 90 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 WDR73Q6P4I2 378 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 OR5R1Q8NH85 324 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 PIFOQ8TCI5 191 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 CCDC140Q96MF4 163 aa8.21□□□□□ -1.09
TPM1-210ENST00000558264 C19orf71A6NCJ1 209 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 ZNF705FA8MVS1 300 aaPredicted RBP8.21□□□□□ -1.1
TPM1-210ENST00000558264 ZNF253O75346 499 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 BTF3P20290 206 aaKnown RBP8.21□□□□□ -1.1
TPM1-210ENST00000558264 TOMM20LQ6UXN7 152 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 ZNF502Q8TBZ5 544 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 TPPP3Q9BW30 176 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 SAMD10Q9BYL1 202 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 RABAC1Q9UI14 185 aa8.21□□□□□ -1.1
TPM1-210ENST00000558264 ZANQ9Y493 2812 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 TRBV9A0A0B4J1U6 114 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 AVPP01185 164 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 PMCHP20382 165 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 Q6ZWC4 215 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 Q8TAT8 98 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 PSG8Q9UQ74 426 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 RNF114Q9Y508 228 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 SMAD5-AS1Q9Y6J3 95 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 TMSB15BA0A087X1C1 80 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 DIRC3C9JPN6 131 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 HLA-DQA1P01909 254 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 APOHP02749 345 aaPredicted RBP8.2□□□□□ -1.1
TPM1-210ENST00000558264 MT-ND6P03923 174 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 LCNL1Q6ZST4 164 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 FAM19A2Q8N3H0 131 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 ZNF48Q96MX3 618 aaPredicted RBP8.2□□□□□ -1.1
TPM1-210ENST00000558264 AAMDCQ9H7C9 122 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 SELENOKQ9Y6D0 94 aa8.2□□□□□ -1.1
TPM1-210ENST00000558264 H3BUX3 64 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 PSG3Q16557 428 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 Q6ZS46 218 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 PRSS22Q9GZN4 317 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 HIF1ANQ9NWT6 349 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 PAX1P15863 534 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 CRIP1P50238 77 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 FOXA3P55318 350 aaPredicted RBP8.19□□□□□ -1.1
TPM1-210ENST00000558264 ZNF664Q8N3J9 261 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 RNF182Q8N6D2 247 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 MOB4Q9Y3A3 225 aa8.19□□□□□ -1.1
TPM1-210ENST00000558264 MUC21A0A0G2JKD1 596 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 MUC21A0A140T8X8 626 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 A8MWL6 223 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 M0QZ24 198 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 MSMBP08118 114 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 TPPP2P59282 170 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 MUC21Q5SSG8 566 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 ANKRD17O75179 2603 aaKnown RBP8.18□□□□□ -1.1
TPM1-210ENST00000558264 ABCA12Q86UK0 2595 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 TRAV41A0A0B4J266 112 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 ZNF705DP0CH99 300 aaPredicted RBP8.18□□□□□ -1.1
TPM1-210ENST00000558264 ZNF705BP0CI00 300 aaPredicted RBP8.18□□□□□ -1.1
TPM1-210ENST00000558264 RPL7P18124 248 aaKnown RBP8.18□□□□□ -1.1
TPM1-210ENST00000558264 NTF3P20783 257 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 BLCAPP62952 87 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 TMEM75Q8N9X5 138 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 VN1R17PQ8TDU5 208 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 ZFAND3Q9H8U3 227 aa8.18□□□□□ -1.1
TPM1-210ENST00000558264 POLR3KQ9Y2Y1 108 aaPredicted RBP8.18□□□□□ -1.1
TPM1-210ENST00000558264 K7EQM0 130 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 AMTP48728 403 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 Q0VG73 95 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 SMIM12Q96EX1 92 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 VGLL1Q99990 258 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 ZNF492Q9P255 531 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 PTPN13Q12923 2485 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 A0A1W2PS18 150 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 CHEK1O14757 476 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 IGHV3-11P01762 117 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 KRTDAPP60985 99 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 HBBP68871 147 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 TDRG1Q3Y452 100 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 C18orf32Q8TCD1 76 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 RNF24Q9Y225 148 aa8.17□□□□□ -1.1
TPM1-210ENST00000558264 A0A1B0GXF2 115 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms