RNA–Protein interactions for RNA: ENST00000558234.1

RORA-207, Transcript of RAR related orphan receptor A, humanhuman

TSL 1 (best)

Gene RORA, Length 3,910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RORA-207ENST00000558234 LEMD1Q68G75 181 aa8.69□□□□□ -1.02
RORA-207ENST00000558234 GAR1Q9NY12 217 aaKnown RBP8.69□□□□□ -1.02
RORA-207ENST00000558234 B4DEV8 164 aa8.69□□□□□ -1.02
RORA-207ENST00000558234 PPP5D1E7EU14 171 aa8.69□□□□□ -1.02
RORA-207ENST00000558234 KPRPQ5T749 579 aaPredicted RBP8.69□□□□□ -1.02
RORA-207ENST00000558234 ZNF575Q86XF7 245 aa8.69□□□□□ -1.02
RORA-207ENST00000558234 KLHL30-AS1Q8NEE0 82 aa8.69□□□□□ -1.02
RORA-207ENST00000558234 PUS1Q9Y606 427 aaKnown RBP eCLIP8.69□□□□□ -1.02
RORA-207ENST00000558234 SLC17A3O00476 420 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 SOCS3O14543 225 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 PHOX2AO14813 284 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 FABP1P07148 127 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 GPR183P32249 361 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 C12orf54Q6X4T0 127 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 ISOC2Q96AB3 205 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 OR4F4Q96R69 305 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 LINC01619G3V211 115 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 HIST1H1EP10412 219 aaKnown RBP8.68□□□□□ -1.02
RORA-207ENST00000558234 PDE6HQ13956 83 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 DEFB136Q30KP8 78 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 C16orf54Q6UWD8 224 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 UNQ9165/PRO28630Q6UXU0 137 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 LYPD1Q8N2G4 141 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 TVP23CQ96ET8 276 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 NAT8Q9UHE5 227 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 HAX1O00165 279 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 NDUFA4O00483 81 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 UBE2G2P60604 165 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 CLEC19AQ6UXS0 136 aa8.68□□□□□ -1.02
RORA-207ENST00000558234 JMJD1CQ15652 2540 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 CCL24O00175 119 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 HOXD3P31249 432 aaPredicted RBP8.67□□□□□ -1.02
RORA-207ENST00000558234 LYZP61626 148 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 OR1N2Q8NGR9 330 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 NARS2Q96I59 477 aaKnown RBP8.67□□□□□ -1.02
RORA-207ENST00000558234 Q56UQ5 140 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 C1orf194Q5T5A4 169 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 CBLN2Q8IUK8 224 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 Q8WTZ3 238 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 GLMPQ8WWB7 406 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 PYGO2Q9BRQ0 406 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 K7EMT4 169 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 NUPL2O15504 423 aaKnown RBP8.67□□□□□ -1.02
RORA-207ENST00000558234 NBEAP1P0C6P0 100 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 OR11H1Q8NG94 326 aa8.67□□□□□ -1.02
RORA-207ENST00000558234 TMEM213A2RRL7 107 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 IGHV3-11P01762 117 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 CSN3P07498 182 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 EDN2P20800 178 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 BTN1A1Q13410 526 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 C1QL4Q86Z23 238 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 DLX4Q92988 240 aaPredicted RBP8.66□□□□□ -1.02
RORA-207ENST00000558234 FOLR2P14207 255 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 SLURP1P55000 103 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
RORA-207ENST00000558234 TRAV8-2A0A0B4J237 113 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 CXorf65A6NEN9 183 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 GGCTO75223 188 aaKnown RBP8.66□□□□□ -1.02
RORA-207ENST00000558234 C11orf44Q8N8P7 122 aa8.66□□□□□ -1.02
RORA-207ENST00000558234 ZNF320A2RRD8 509 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 OR7C2O60412 319 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 LTAP01374 205 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 RPL35P42766 123 aaKnown RBP8.65□□□□□ -1.02
RORA-207ENST00000558234 TMEM183BQ1AE95 376 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 SMIM12Q96EX1 92 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 GCGP01275 180 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 ARL3P36405 182 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 EGFEM1PQ0D2K5 195 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 OCC1Q8TAD7 63 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 OTORQ9NRC9 128 aa8.65□□□□□ -1.02
RORA-207ENST00000558234 RELQ04864 619 aaPredicted RBP8.65□□□□□ -1.03
RORA-207ENST00000558234 ELOBQ15370 118 aa8.65□□□□□ -1.03
RORA-207ENST00000558234 TMEM241Q24JQ0 296 aa8.65□□□□□ -1.03
RORA-207ENST00000558234 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.03
RORA-207ENST00000558234 EPDR1Q9UM22 224 aa8.65□□□□□ -1.03
RORA-207ENST00000558234 PFN1P07737 140 aaKnown RBP8.64□□□□□ -1.03
RORA-207ENST00000558234 OR4F17Q8NGA8 305 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 Q9H3A6 140 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 RABAC1Q9UI14 185 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 HUWE1Q7Z6Z7 4374 aaKnown RBP8.64□□□□□ -1.03
RORA-207ENST00000558234 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 DUX3Q96PT4 197 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 ZNF727A8MUV8 499 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 TAS2R60P59551 318 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 SAMD5Q5TGI4 173 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 HIST1H2BAQ96A08 127 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 SMIM7Q9BQ49 75 aa8.64□□□□□ -1.03
RORA-207ENST00000558234 PGPEP1LA6NFU8 196 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 BPIFA4PQ86YQ2 179 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 PPP1R14DQ9NXH3 145 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 PEX7O00628 323 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 TCRAP04437 139 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 SUMO1P63165 101 aaKnown RBP8.63□□□□□ -1.03
RORA-207ENST00000558234 TMEM88Q6PEY1 159 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 C15orf54Q8N8G6 183 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 RPUSD4Q96CM3 377 aaKnown RBP8.63□□□□□ -1.03
RORA-207ENST00000558234 C20orf24Q9BUV8 137 aa8.63□□□□□ -1.03
RORA-207ENST00000558234 ZNF331Q9NQX6 463 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms