RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 SMAD5-AS1Q9Y6J3 95 aa12.78□□□□□ -0.36
SNX1-203ENST00000558040 SETD2Q9BYW2 2564 aaPredicted RBP12.77□□□□□ -0.36
SNX1-203ENST00000558040 FAM74A7A6NL05 159 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 SNRPCP09234 159 aaKnown RBP12.77□□□□□ -0.37
SNX1-203ENST00000558040 PSG9Q00887 426 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 SAMD13Q5VXD3 122 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 LYPD1Q8N2G4 141 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 SLC50A1Q9BRV3 221 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 SMDT1Q9H4I9 107 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 MLXQ9UH92 298 aa12.77□□□□□ -0.37
SNX1-203ENST00000558040 C11orf94C9JXX5 98 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 H3BTX0 84 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 RANP62826 216 aaKnown RBP12.76□□□□□ -0.37
SNX1-203ENST00000558040 MEF2BQ02080 365 aaPredicted RBP12.76□□□□□ -0.37
SNX1-203ENST00000558040 UQCC3Q6UW78 93 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 ADAMTSL5Q6ZMM2 481 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 AAMDCQ9H7C9 122 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 NRN1Q9NPD7 142 aa12.76□□□□□ -0.37
SNX1-203ENST00000558040 YTHDF2Q9Y5A9 579 aaKnown RBP12.76□□□□□ -0.37
SNX1-203ENST00000558040 PAFAH1B2P68402 229 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 FAM90A2PQ658T7 463 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 EIF4E3Q8N5X7 224 aaKnown RBP12.75□□□□□ -0.37
SNX1-203ENST00000558040 RXFP4Q8TDU9 374 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 C17orf77Q96MU5 243 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 RARRES2Q99969 163 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 Q9H3A6 140 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 OTORQ9NRC9 128 aa12.75□□□□□ -0.37
SNX1-203ENST00000558040 NDUFS6O75380 124 aaKnown RBP12.74□□□□□ -0.37
SNX1-203ENST00000558040 SAP30O75446 220 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 NDUFB4O95168 129 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 RIPPLY3P57055 190 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 ICAM4Q14773 271 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 RBPMS2Q6ZRY4 209 aaKnown RBP12.74□□□□□ -0.37
SNX1-203ENST00000558040 TCEAL7Q9BRU2 100 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 TREM1Q9NP99 234 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 CLEC5AQ9NY25 188 aa12.74□□□□□ -0.37
SNX1-203ENST00000558040 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 TRAV25A0A0B4J276 109 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 F6UZH7 168 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 SLC17A3O00476 420 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 PDE6DO43924 150 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 ATP5G3P48201 142 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 SUMO1P63165 101 aaKnown RBP12.73□□□□□ -0.37
SNX1-203ENST00000558040 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 C16orf92Q96LL3 132 aa12.73□□□□□ -0.37
SNX1-203ENST00000558040 ZNF331Q9NQX6 463 aaPredicted RBP12.73□□□□□ -0.37
SNX1-203ENST00000558040 PGPA6NDG6 321 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 GGTLC3B5MD39 225 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 DNASE2O00115 360 aaPredicted RBP12.72□□□□□ -0.37
SNX1-203ENST00000558040 CD33P20138 364 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 C5orf17Q8NAS9 161 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 OR2K2Q8NGT1 345 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 CMTM2Q8TAZ6 248 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 MCRIP2Q9BUT9 160 aaKnown RBP12.72□□□□□ -0.37
SNX1-203ENST00000558040 MS4A6AQ9H2W1 248 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 PRELID1Q9Y255 219 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 SELENOKQ9Y6D0 94 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 ATRQ13535 2644 aa12.72□□□□□ -0.37
SNX1-203ENST00000558040 TRAV2A0A0B4J234 112 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 ISLRO14498 428 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 TSPAN4O14817 238 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 SLC25A5P05141 298 aaKnown RBP12.71□□□□□ -0.37
SNX1-203ENST00000558040 ID1P41134 155 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 CSN1S1P47710 185 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 INSL3P51460 131 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 CD81P60033 236 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 SRSF3P84103 164 aaKnown RBP12.71□□□□□ -0.37
SNX1-203ENST00000558040 CCDC28AQ8IWP9 274 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 SLC7A5P1Q8MH63 180 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 EXOC3-AS1Q8N2X6 119 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 GBGT1Q8N5D6 347 aa12.71□□□□□ -0.37
SNX1-203ENST00000558040 TMEM250H0YL14 139 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 SOCS3O14543 225 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 CD300EQ496F6 205 aaPredicted RBP12.7□□□□□ -0.38
SNX1-203ENST00000558040 C9orf66Q5T8R8 295 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 TMEM61Q8N0U2 210 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 ARL6IP6Q8N6S5 226 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 DCANP1Q8TF63 244 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 CITED4Q96RK1 184 aa12.7□□□□□ -0.38
SNX1-203ENST00000558040 IGLV1-51P01701 117 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 SRP19P09132 144 aaKnown RBP12.69□□□□□ -0.38
SNX1-203ENST00000558040 LCN12Q6JVE5 192 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 WFDC3Q8IUB2 231 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 WFDC9Q8NEX5 89 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 HIST1H2BAQ96A08 127 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 MRPL53Q96EL3 112 aaKnown RBP12.69□□□□□ -0.38
SNX1-203ENST00000558040 SPAG8Q99932 426 aaPredicted RBP12.69□□□□□ -0.38
SNX1-203ENST00000558040 SLC35B3Q9H1N7 401 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 EPDR1Q9UM22 224 aa12.69□□□□□ -0.38
SNX1-203ENST00000558040 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
SNX1-203ENST00000558040 OR4C46A6NHA9 309 aa12.68□□□□□ -0.38
SNX1-203ENST00000558040 K7EQG2 157 aa12.68□□□□□ -0.38
SNX1-203ENST00000558040 TFPI2P48307 235 aa12.68□□□□□ -0.38
SNX1-203ENST00000558040 SNRPD3P62318 126 aaKnown RBP12.68□□□□□ -0.38
SNX1-203ENST00000558040 C11orf52Q96A22 123 aa12.68□□□□□ -0.38
SNX1-203ENST00000558040 RPUSD4Q96CM3 377 aaKnown RBP12.68□□□□□ -0.38
SNX1-203ENST00000558040 SERTM2A0A1B0GWG4 89 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 SCO2A0A1W2PP80 73 aa12.67□□□□□ -0.38
SNX1-203ENST00000558040 K7EQM0 130 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms