RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 DEFA6Q01524 100 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 PAXXQ9BUH6 204 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 FBN3Q75N90 2809 aa11.38□□□□□ -0.59
NEDD1-213ENST00000557644 A0A087X0K7 114 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 KHDC3LQ587J8 217 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 APRG1Q8IVJ8 170 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 DEFB125Q8N687 156 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 C16orf92Q96LL3 132 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 ACTR3CQ9C0K3 210 aaPredicted RBP11.37□□□□□ -0.59
NEDD1-213ENST00000557644 MAP6D1Q9H9H5 199 aa11.37□□□□□ -0.59
NEDD1-213ENST00000557644 TRAV8-2A0A0B4J237 113 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 OR11H12B2RN74 326 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 PRB4P10163 310 aaPredicted RBP11.36□□□□□ -0.59
NEDD1-213ENST00000557644 TAS2R45P59539 299 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 RNF182Q8N6D2 247 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 BLNKQ8WV28 456 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 RNF141Q8WVD5 230 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 FXYD5Q96DB9 178 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 ARL14EPLP0DKL9 152 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 HLA-DMBP28068 263 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 DEFB131AP59861 70 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 PSMG4Q5JS54 123 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 FAM74A1Q5RGS3 127 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 C20orf173Q96LM9 149 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 LINC00052Q96N35 136 aa11.36□□□□□ -0.59
NEDD1-213ENST00000557644 STAG3L2P0CL84 134 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 STAG3L3P0CL85 134 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 HIST1H1EP10412 219 aaKnown RBP11.35□□□□□ -0.59
NEDD1-213ENST00000557644 MEOX2P50222 304 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 DEFB1P60022 68 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 SAT2Q96F10 170 aaPredicted RBP11.35□□□□□ -0.59
NEDD1-213ENST00000557644 TRBV19A0A075B6N1 114 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 UMAD1C9J7I0 102 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 UBE2L3P68036 154 aaKnown RBP11.35□□□□□ -0.59
NEDD1-213ENST00000557644 LCN15Q6UWW0 184 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 ALKAL2Q6UX46 152 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 FAM213BQ8TBF2 198 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 LRRC20Q8TCA0 184 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 CITED4Q96RK1 184 aa11.35□□□□□ -0.59
NEDD1-213ENST00000557644 CTXND1A0A1B0GTU2 59 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 ISLRO14498 428 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 NDUFB4O95168 129 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 NBEAP1P0C6P0 100 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 FGF8P55075 233 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-213ENST00000557644 SNRPD3P62318 126 aaKnown RBP11.34□□□□□ -0.59
NEDD1-213ENST00000557644 EIF5AL1Q6IS14 154 aaKnown RBP11.34□□□□□ -0.59
NEDD1-213ENST00000557644 ZNF331Q9NQX6 463 aaPredicted RBP11.34□□□□□ -0.59
NEDD1-213ENST00000557644 PSMB3P49720 205 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 PQLC2Q6ZP29 291 aa11.34□□□□□ -0.59
NEDD1-213ENST00000557644 IGHV4-30-4P0DP06 118 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 ID1P41134 155 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 PHYHIPLQ96FC7 376 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 PRKDCP78527 4128 aaKnown RBP11.33□□□□□ -0.6
NEDD1-213ENST00000557644 GUK1Q16774 197 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 FAM110AQ9BQ89 295 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 TMPRSS5Q9H3S3 457 aa11.33□□□□□ -0.6
NEDD1-213ENST00000557644 MAP1LC3B2A6NCE7 125 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 GCHFRP30047 84 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 SULT1A2P50226 295 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 DEFB121Q5J5C9 76 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 IQCF2Q8IXL9 164 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 EXOC3-AS1Q8N2X6 119 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 MAP1LC3BQ9GZQ8 125 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 SRD5A3Q9H8P0 318 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 A0A1B0GV50 99 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 KNCNA6PVL3 124 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 CXorf1O96002 111 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 SAMD13Q5VXD3 122 aa11.32□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF705FA8MVS1 300 aaPredicted RBP11.31□□□□□ -0.6
NEDD1-213ENST00000557644 F6UB75 175 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 RANP62826 216 aaKnown RBP11.31□□□□□ -0.6
NEDD1-213ENST00000557644 GDF5OSQ5U4N7 250 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 MRAPQ8TCY5 172 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 SFT2D1Q8WV19 159 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 SLC50A1Q9BRV3 221 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 PDE6HQ13956 83 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 DPPA3Q6W0C5 159 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 TUBA4BQ9H853 241 aa11.31□□□□□ -0.6
NEDD1-213ENST00000557644 AGRNO00468 2067 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 M0R3E3 92 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF253O75346 499 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 RAB5CP51148 216 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 CMC4P56277 68 aaPredicted RBP11.3□□□□□ -0.6
NEDD1-213ENST00000557644 ACTL10Q5JWF8 245 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 PSG3Q16557 428 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF738Q8NE65 137 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 MBD3L1Q8WWY6 194 aa11.3□□□□□ -0.6
NEDD1-213ENST00000557644 RBMY1BA6NDE4 496 aaKnown RBP11.29□□□□□ -0.6
NEDD1-213ENST00000557644 RBMY1EA6NEQ0 496 aaKnown RBP11.29□□□□□ -0.6
NEDD1-213ENST00000557644 H2AFB1P0C5Y9 115 aa11.29□□□□□ -0.6
NEDD1-213ENST00000557644 RBMY1DP0C7P1 496 aaKnown RBP11.29□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF705DP0CH99 300 aaPredicted RBP11.29□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF705BP0CI00 300 aaPredicted RBP11.29□□□□□ -0.6
NEDD1-213ENST00000557644 ICAM4Q14773 271 aa11.29□□□□□ -0.6
NEDD1-213ENST00000557644 SUN5Q8TC36 379 aa11.29□□□□□ -0.6
NEDD1-213ENST00000557644 PRAC2D3DTV9 90 aa11.28□□□□□ -0.6
NEDD1-213ENST00000557644 PSG9Q00887 426 aa11.28□□□□□ -0.6
NEDD1-213ENST00000557644 Q9H3A6 140 aa11.28□□□□□ -0.6
NEDD1-213ENST00000557644 ZNF705EA8MWA4 302 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-213ENST00000557644 FRMD6-AS1P0C7T7 363 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms