RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 PGPEP1LA6NFU8 196 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 ZNF785A8K8V0 405 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 SLC17A3O00476 420 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 RNASE1P07998 156 aaKnown RBP9.58□□□□□ -0.88
SHMT2-233ENST00000557529 CSN1S1P47710 185 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 Q6ZSV7 163 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 SMIM12Q96EX1 92 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 SFRP2Q96HF1 295 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 OR5B12Q96R08 314 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 JMJD8Q96S16 334 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 ESM1Q9NQ30 184 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 AURKAIP1Q9NWT8 199 aaPredicted RBP9.58□□□□□ -0.88
SHMT2-233ENST00000557529 RPH3ALQ9UNE2 315 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 SMAD5-AS1Q9Y6J3 95 aa9.58□□□□□ -0.88
SHMT2-233ENST00000557529 MXRA5Q9NR99 2828 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 ACANP16112 2415 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 SONP18583 2426 aaKnown RBP9.57□□□□□ -0.88
SHMT2-233ENST00000557529 TRBV6-1A0A0K0K1D8 114 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 ZNF320A2RRD8 509 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 K7EMT4 169 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 ISLRO14498 428 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 ZNF207O43670 478 aaKnown RBP9.57□□□□□ -0.88
SHMT2-233ENST00000557529 S100PP25815 95 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 UNQ9165/PRO28630Q6UXU0 137 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 BAGE2Q86Y30 109 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 KLHDC1Q8N7A1 406 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 OR10G8Q8NGN5 311 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 LINC00479Q96M42 142 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 YPEL4Q96NS1 127 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 SLC50A1Q9BRV3 221 aa9.57□□□□□ -0.88
SHMT2-233ENST00000557529 NOTCH2Q04721 2471 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 TRAV34A0A0B4J273 112 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 K7EN84 100 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 GCGP01275 180 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 IGLV2-8P01709 118 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 APOHP02749 345 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-233ENST00000557529 BMI1P35226 326 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 HILS1P60008 231 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 ELOBQ15370 118 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 RPEL1Q2QD12 228 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 GOLT1AQ6ZVE7 132 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 FAM24BQ8N5W8 94 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 IMMP2LQ96T52 175 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 SMR3AQ99954 134 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 ZNF331Q9NQX6 463 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-233ENST00000557529 BIN3Q9NQY0 253 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 DAZ1Q9NQZ3 744 aaKnown RBP9.56□□□□□ -0.88
SHMT2-233ENST00000557529 UFC1Q9Y3C8 167 aa9.56□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV3OR16-13A0A075B7E8 117 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV3-74A0A0B4J1X5 117 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV3-66A0A0C4DH42 116 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
SHMT2-233ENST00000557529 MGST1P10620 155 aaKnown RBP9.55□□□□□ -0.88
SHMT2-233ENST00000557529 KCNIP4Q6PIL6 250 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 TMEM75Q8N9X5 138 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 GLMPQ8WWB7 406 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 C16orf95Q9H693 158 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 OSTCQ9NRP0 149 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 CLEC5AQ9NY25 188 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 URGCP-MRPS24S4R325 110 aa9.55□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV3-49A0A0A0MS15 119 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 DIRC3C9JPN6 131 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 LTAP01374 205 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 FOLR2P14207 255 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 RAB5AP20339 215 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 CDX1P47902 265 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-233ENST00000557529 ERVFC1-1P60608 527 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 REC114Q7Z4M0 266 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 WFDC12Q8WWY7 111 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 BTF3L4Q96K17 158 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 SVEP1Q4LDE5 3571 aa9.54□□□□□ -0.88
SHMT2-233ENST00000557529 TRBV24-1A0A075B6N3 115 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 M0R3E3 92 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 LGALS9O00182 355 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 PFN1P07737 140 aaKnown RBP9.53□□□□□ -0.88
SHMT2-233ENST00000557529 FLI1Q01543 452 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-233ENST00000557529 PSG3Q16557 428 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 FAM231DQ6ZW35 169 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 Q86TA4 180 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 MRPL53Q96EL3 112 aaKnown RBP9.53□□□□□ -0.88
SHMT2-233ENST00000557529 SMPXQ9UHP9 88 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 ZFP30Q9Y2G7 519 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 HIVEP2P31629 2446 aa9.53□□□□□ -0.88
SHMT2-233ENST00000557529 IGHV4OR15-8A0A075B7B6 117 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 A0A087WW49 117 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 A8MWP6 167 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 IGLV2-11P01706 119 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 OR5I1Q13606 314 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 TM4SF20Q53R12 229 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 IBA57Q5T440 356 aaKnown RBP9.52□□□□□ -0.88
SHMT2-233ENST00000557529 C8orf86Q6ZUL3 223 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 C1QL4Q86Z23 238 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 C4orf3Q8WVX3 66 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 SGK494Q96LW2 274 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 MLST8Q9BVC4 326 aa9.52□□□□□ -0.88
SHMT2-233ENST00000557529 RHPN1-AS1Q9BWJ2 59 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms