RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 EBPLQ9BY08 206 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 DPY30Q9C005 99 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 WDR61Q9GZS3 305 aaKnown RBP2.89□□□□□ -1.95
PRPF39-212ENST00000557477 SLC35B3Q9H1N7 401 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 OR2D2Q9H210 308 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 MAP1LC3AQ9H492 121 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 HES4Q9HCC6 221 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 SPANXB1Q9NS25 103 aaPredicted RBP2.89□□□□□ -1.95
PRPF39-212ENST00000557477 TMEM106BQ9NUM4 274 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 TMEM242Q9NWH2 141 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 ANKHD1Q8IWZ3 2542 aaKnown RBP2.89□□□□□ -1.95
PRPF39-212ENST00000557477 PKDREJQ9NTG1 2253 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 GTF3C1Q12789 2109 aa2.89□□□□□ -1.95
PRPF39-212ENST00000557477 SPG11Q96JI7 2443 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 IGLV4-69A0A075B6H9 119 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 TRAV14DV4A0A0A6YYC5 116 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 TRGV5A0A0B4J1U4 118 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 IGHV3-66A0A0C4DH42 116 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 A0A1W2PRF3 423 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 A0A1W2PRM7 423 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 OR2T8A6NH00 312 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF850A8MQ14 1090 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 C9JQL5 133 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 INS-IGF2F8WCM5 200 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 FXYD1O00168 92 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 PLPP3O14495 311 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 OR7C1O76099 320 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 UBL3O95164 117 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 CYB5AP00167 134 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 KLK1P06870 262 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 CRYGDP07320 174 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 SPINK8P0C7L1 97 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF728P0DKX0 622 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF823P16415 610 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 NTF3P20783 257 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 GRPRP30550 384 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 PYCR1P32322 319 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 EMP1P54849 157 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 UBE2MP61081 183 aaKnown RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 RPS15AP62244 130 aaKnown RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 TFF3Q07654 80 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 OR7A5Q15622 319 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 TBC1D28Q2M2D7 210 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 DEFB134Q4QY38 66 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF684Q5T5D7 378 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 MYO7BQ6PIF6 2116 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 SBSNQ6UWP8 590 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 C12orf54Q6X4T0 127 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 C1orf174Q8IYL3 243 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 KRTCAP2Q8N6L1 136 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZDHHC22Q8N966 263 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 OR52E2Q8NGJ4 325 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 OR2A1Q8NGT9 310 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 LINC01560Q8TB33 94 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 RNASE6Q93091 150 aaKnown RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZMYND19Q96E35 227 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 SLC25A21Q9BQT8 299 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 SLC25A2Q9BXI2 301 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 SAMD10Q9BYL1 202 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 TTTY12Q9BZ98 90 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 IFI27L2Q9H2X8 130 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 NPVFQ9HCQ7 196 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 FAM206AQ9NX38 181 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 PRO0628Q9UI54 55 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ANXA10Q9UJ72 324 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 KLK12Q9UKR0 248 aa2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZNF443Q9Y2A4 671 aaPredicted RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 LSM5Q9Y4Y9 91 aaKnown RBP2.88□□□□□ -1.95
PRPF39-212ENST00000557477 ZGRF1Q86YA3 2104 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 TACC2O95359 2948 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 NAV3Q8IVL0 2385 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 AKAP9Q99996 3911 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 IGLV3-16A0A075B6K0 115 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 IGLV3-12A0A075B6K2 115 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 hCG_1818297A0A087WSY0 165 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 IGLV1-36A0A0B4J1U3 117 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 C7orf71A4D174 169 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 OR4C46A6NHA9 309 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 GABARAPH6UMI1 98 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 K7EMT4 169 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 NDUFB6O95139 128 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 SFT2D2O95562 160 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 APOC2P02655 101 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 C1QAP02745 245 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 HIST1H1DP16402 221 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 RPL7P18124 248 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 ORM2P19652 201 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 RPS4Y1P22090 263 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 PPIBP23284 216 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 RPL12P30050 165 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 SRP14P37108 136 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 DAPP51397 102 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 H2BFSP57053 126 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 LCN6P62502 163 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 RPS28P62857 69 aaKnown RBP2.87□□□□□ -1.95
PRPF39-212ENST00000557477 SLC35B1P78383 322 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 KLRD1Q13241 179 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 FAM53BQ14153 422 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 PMVKQ15126 192 aa2.87□□□□□ -1.95
PRPF39-212ENST00000557477 ADIRFQ15847 76 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms