RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 A0A0J9YY99 117 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 SMCO3A2RU48 225 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 LYRM1O43325 122 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 HOXB5P09067 269 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 OR4E1P0C645 316 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 CLINT1Q14677 625 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 Q8N1X5 172 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 S100ZQ8WXG8 99 aa9.8□□□□□ -0.84
SLIRP-210ENST00000557431 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
SLIRP-210ENST00000557431 SYNGR2O43760 224 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 TSPOP30536 169 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 ATP5IP56385 69 aaPredicted RBP9.79□□□□□ -0.84
SLIRP-210ENST00000557431 OR5I1Q13606 314 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 OR8A1Q8NGG7 326 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 PTTG2Q9NZH5 202 aa9.79□□□□□ -0.84
SLIRP-210ENST00000557431 CBY3A6NI87 242 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 OR5G3P0C626 314 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 CXCL3P19876 107 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 ANXA7P20073 488 aaKnown RBP9.78□□□□□ -0.84
SLIRP-210ENST00000557431 CYP2G1PQ6ZSU1 146 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 OR4D5Q8NGN0 318 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 SHANK2-AS3Q9BTD1 123 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 Q9H8V8 135 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 BATF3Q9NR55 127 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 PPP1R14DQ9NXH3 145 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 SLC45A2Q9UMX9 530 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 HIGD1AQ9Y241 93 aa9.78□□□□□ -0.84
SLIRP-210ENST00000557431 TRAV26-1A0A087WT03 109 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 H3BTX0 84 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 J3KRW8 73 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 MED6O75586 246 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 ADAP1O75689 374 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 CFDP00746 253 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-210ENST00000557431 TCRBP04435 133 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 IL5P05113 134 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 HOXA5P20719 270 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 RRAS2P62070 204 aaPredicted RBP9.77□□□□□ -0.85
SLIRP-210ENST00000557431 PSG3Q16557 428 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 C4orf46Q504U0 113 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 C16orf74Q96GX8 76 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 GPR82Q96P67 336 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 C20orf85Q9H1P6 137 aa9.77□□□□□ -0.85
SLIRP-210ENST00000557431 LINC00869P0C866 280 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 TAS2R60P59551 318 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 RAP2BP61225 183 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 B2MP61769 119 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 POLR2GP62487 172 aaKnown RBP eCLIP9.76□□□□□ -0.85
SLIRP-210ENST00000557431 TMEM144Q7Z5S9 345 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 LRRC20Q8TCA0 184 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 RNASE8Q8TDE3 154 aaKnown RBP9.76□□□□□ -0.85
SLIRP-210ENST00000557431 GNPNAT1Q96EK6 184 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-210ENST00000557431 ZNF586Q9NXT0 402 aa9.76□□□□□ -0.85
SLIRP-210ENST00000557431 TIMM8BQ9Y5J9 83 aaPredicted RBP9.76□□□□□ -0.85
SLIRP-210ENST00000557431 GAGE12BA1L429 117 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 MRPS12O15235 138 aaKnown RBP9.75□□□□□ -0.85
SLIRP-210ENST00000557431 GAGE7O76087 117 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 GAGE12FP0CL80 117 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 GAGE12GP0CL81 117 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 GAGE12IP0CL82 117 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 ID3Q02535 119 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 ZNF846Q147U1 533 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 ESRGQ1W209 222 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 PATE2Q6UY27 113 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 MITD1Q8WV92 249 aa9.75□□□□□ -0.85
SLIRP-210ENST00000557431 RPUSD4Q96CM3 377 aaKnown RBP9.75□□□□□ -0.85
SLIRP-210ENST00000557431 CIB3Q96Q77 187 aaPredicted RBP9.75□□□□□ -0.85
SLIRP-210ENST00000557431 STRAPQ9Y3F4 350 aaKnown RBP9.75□□□□□ -0.85
SLIRP-210ENST00000557431 TRAV6A0A075B6T7 132 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 PMS2P5A8MQ11 134 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 RPL7P18124 248 aaKnown RBP9.74□□□□□ -0.85
SLIRP-210ENST00000557431 CDKN1BP46527 198 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 RPP30P78346 268 aaKnown RBP9.74□□□□□ -0.85
SLIRP-210ENST00000557431 SLC38A11Q08AI6 406 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 ASAH1Q13510 395 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 TMEM256Q8N2U0 113 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 TMEM263Q8WUH6 116 aaKnown RBP9.74□□□□□ -0.85
SLIRP-210ENST00000557431 ARL6Q9H0F7 186 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 NUDT15Q9NV35 164 aa9.74□□□□□ -0.85
SLIRP-210ENST00000557431 A0A087X0K7 114 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 FAM240BA0A1B0GVZ2 78 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 SLC17A3O00476 420 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 SSSCA1O60232 199 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 HYPMO75409 117 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 UPK1BO75841 260 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 GFI1BQ5VTD9 330 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 MZT2BQ6NZ67 158 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 Q9H3A6 140 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 PSENENQ9NZ42 101 aa9.73□□□□□ -0.85
SLIRP-210ENST00000557431 H2AFB2P0C5Z0 115 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 METTL15P1P0C7V9 234 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 MORN5Q5VZ52 161 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 RXFP4Q8TDU9 374 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 ARV1Q9H2C2 271 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 TMPRSS5Q9H3S3 457 aa9.72□□□□□ -0.85
SLIRP-210ENST00000557431 H7BYZ3 331 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 M6PRP20645 277 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 LINC00315P59091 139 aa9.71□□□□□ -0.86
SLIRP-210ENST00000557431 PLP1P60201 277 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms