RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 RPL30P62888 115 aaKnown RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 HBG1P69891 147 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 HBG2P69892 147 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TNFRSF9Q07011 255 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ZNF266Q14584 549 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ATP6V1FQ16864 119 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 KLK9Q2XQG4 91 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 BSXQ3C1V8 233 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 SP6Q3SY56 376 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 Q5BKY6 102 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 PRAMEF5Q5TYX0 476 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 EIF5AL1Q6IS14 154 aaKnown RBP2.07□□□□□ -2.08
VRK1-207ENST00000557352 CLEC2AQ6UVW9 174 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TMEM14EPQ6UXP3 125 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 H2BFWTQ7Z2G1 175 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 KRTAP13-1Q8IUC0 172 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ZNF680Q8NEM1 530 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 DEFB108BQ8NET1 73 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 OR4P4Q8NGL7 312 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 OR10G9Q8NGN4 311 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 OR1S1Q8NH92 325 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 CLDND2Q8NHS1 167 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 TMEM167AQ8TBQ9 72 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 GPR146Q96CH1 333 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 NABP2Q9BQ15 211 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 GGACTQ9BVM4 153 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 SLC25A31Q9H0C2 315 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 ARL6Q9H0F7 186 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 KLK9Q9UKQ9 250 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 PRNDQ9UKY0 176 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 WASHC3Q9Y3C0 194 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 NF1P21359 2839 aa2.07□□□□□ -2.08
VRK1-207ENST00000557352 HECTD1Q9ULT8 2610 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 BORCS7-ASMTA0A0B4J1R7 106 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 IGHV3-43A0A0B4J1X8 118 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 IGHV1-3A0A0C4DH29 117 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LINC00862A6NCI5 91 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 FAM25EA8MYX2 175 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LEUTXA8MZ59 168 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 B4DSR2 109 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 UMAD1C9J7I0 102 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LYNX1G3V0Z9 82 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 SMLR1H3BR10 107 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 J3QLI3 93 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 WRBO00258 174 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 UPK2O00526 184 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 MPDU1O75352 247 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 NDUFS6O75380 124 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 NDUFA3O95167 84 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 IGLV2-23P01705 113 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 TFF1P04155 84 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 CRYGBP07316 175 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 SEC11BP0C7V7 166 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 IGHV3-43DP0DP04 118 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LYNX1P0DP58 116 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 OMGP23515 440 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 NFYBP25208 207 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 HTR1DP28221 377 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 RPL12P30050 165 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 TFPI2P48307 235 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 SULT1A1P50225 295 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 ATP5J2P56134 94 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 UBE2KP61086 200 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 HSPE1P61604 102 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 RPL23AP62750 156 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 SERF2P84101 59 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 PRCDQ00LT1 54 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LOXL1Q08397 574 aaPredicted RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 OR5I1Q13606 314 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 VMA21Q3ZAQ7 101 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 RPL39P5Q59GN2 51 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 CLLU1Q5K131 121 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 HCP5Q6MZN7 132 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 DPPA3Q6W0C5 159 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 CAMK2N1Q7Z7J9 78 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 STX12Q86Y82 276 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 TGIF2LXQ8IUE1 241 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 BAP18Q8IXM2 172 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 EIF4E3Q8N5X7 224 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 TEX29Q8N6K0 151 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 Q8N6K4 173 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 NPBQ8NG41 125 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 OR1L8Q8NGR8 309 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 OR1N2Q8NGR9 330 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 OR10X1Q8NGY0 326 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 OR2G3Q8NGZ4 309 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 LYPD6BQ8NI32 183 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 TMEM158Q8WZ71 300 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 H1FXQ92522 213 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 RPEQ96AT9 228 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 FLYWCH2Q96CP2 140 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 MALSU1Q96EH3 234 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 GNPNAT1Q96EK6 184 aaPredicted RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 TSNAXQ99598 290 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 GINS3Q9BRX5 216 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 PSMG3Q9BT73 122 aaPredicted RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 MRPL20Q9BYC9 149 aaKnown RBP2.06□□□□□ -2.08
VRK1-207ENST00000557352 BPESC1Q9GZL8 116 aa2.06□□□□□ -2.08
VRK1-207ENST00000557352 VCX2Q9H322 139 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms