RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 C9orf16Q9BUW7 83 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 CCDC90BQ9GZT6 254 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 ATG5Q9H1Y0 275 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PLCXD1Q9NUJ7 323 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PSORS1C1Q9UIG5 152 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 PAM16Q9Y3D7 125 aa3.08□□□□□ -1.92
SCFD1-223ENST00000557076 TRAV1-2A0A0B4J238 106 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 TMEM235A6NFC5 223 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 IBA57-AS1B1ANH7 110 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 PDCD5O14737 125 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 CASQ2O14958 399 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 SCGNO76038 276 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 RLN1P04808 185 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 PSMA1P25786 263 aaKnown RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 FXYD4P59646 89 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 RPL37AP61513 92 aaKnown RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 SUPT4H1P63272 117 aaKnown RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 ZNF415Q09FC8 603 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 MRPL23Q16540 153 aaKnown RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 OR8G2PQ6IF36 304 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 BAP18Q8IXM2 172 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 CCDC197Q8NCU1 140 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 ZNF555Q8NEP9 628 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 OR5AP2Q8NGF4 316 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 OR51G1Q8NGK1 321 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 OR52E5Q8NH55 327 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 RBPMSQ93062 196 aaKnown RBP3.07□□□□□ -1.92
SCFD1-223ENST00000557076 C20orf144Q9BQM9 153 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 MND1Q9BWT6 205 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 DNAJC4Q9NNZ3 241 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 ACOT13Q9NPJ3 140 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 DIABLOQ9NR28 239 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 ICOSQ9Y6W8 199 aa3.07□□□□□ -1.92
SCFD1-223ENST00000557076 TRGV2A0A075B6R0 118 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 A0A0U1RQV1 116 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 SNRPGP15A8MWD9 76 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 BOLA2-SMG1P6H3BVE0 249 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 GPR31O00270 319 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 IGKV1-39P01597 117 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 IGKV1D-39P04432 117 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 HSMCR30P0CW71 290 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 HTR2BP41595 481 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 RND2P52198 227 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 HERV-K104P61576 105 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 GNGT1P63211 74 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 UBE2V1Q13404 147 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 PSG3Q16557 428 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 CTF1Q16619 201 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 C2orf83Q53S99 150 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 ETFRF1Q6IPR1 90 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 LAIR2Q6ISS4 152 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 ZFP1Q6P2D0 407 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 TMEM17Q86X19 198 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 OR8I2Q8N0Y5 310 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 SLC35G3Q8N808 338 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 RNASEH2CQ8TDP1 164 aaKnown RBP3.06□□□□□ -1.92
SCFD1-223ENST00000557076 PYDC1Q8WXC3 89 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 UFD1Q92890 307 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 RSG1Q9BU20 258 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 FKBP14Q9NWM8 211 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 PRO0255Q9UI72 69 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 RABL2BQ9UNT1 228 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 HHLA3Q9XRX5 114 aa3.06□□□□□ -1.92
SCFD1-223ENST00000557076 LSM2Q9Y333 95 aaKnown RBP3.06□□□□□ -1.92
SCFD1-223ENST00000557076 RRP15Q9Y3B9 282 aaKnown RBP3.06□□□□□ -1.92
SCFD1-223ENST00000557076 IGLV5-37A0A075B6J1 123 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 SNURFLB1AK76 121 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 PRAF2O60831 178 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 FCER2P06734 321 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 OR5AC1P0C628 307 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 S100GP29377 79 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 CDKN1BP46527 198 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 GALR1P47211 349 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 FABP5Q01469 135 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 SPINK9Q5DT21 86 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 IDNKQ5T6J7 187 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 LPCAT3Q6P1A2 487 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 Q6ZTI0 123 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 AHSA2Q719I0 299 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 WFDC10BQ8IUB3 73 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 OR4D5Q8NGN0 318 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 CYGBQ8WWM9 190 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 LINC01600Q96MT4 127 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 FAM210AQ96ND0 272 aa3.05□□□□□ -1.92
SCFD1-223ENST00000557076 MRPL32Q9BYC8 188 aaKnown RBP3.05□□□□□ -1.92
SCFD1-223ENST00000557076 SLC25A39Q9BZJ4 359 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-223ENST00000557076 RCL1Q9Y2P8 373 aaKnown RBP3.05□□□□□ -1.92
SCFD1-223ENST00000557076 TRAV8-2A0A0B4J237 113 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 IGHV3-38A0A0C4DH36 116 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 RAB3BP20337 219 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 CBX5P45973 191 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 CRYBA4P53673 196 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 TAS2R20P59543 309 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 SPCS3P61009 180 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 RHOBP62745 196 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 OR2F1Q13607 317 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 AARDQ4LEZ3 155 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 LINC01556Q5JQF7 62 aa3.04□□□□□ -1.92
SCFD1-223ENST00000557076 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms