RNA–Protein interactions for RNA: ENST00000557005.1

SYNE2-223, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,804 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-223ENST00000557005 PRR20AP86496 221 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 PCP2Q8IVA1 136 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 ATP6V0BQ99437 205 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 MYMXA0A1B0GTQ4 84 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 B9A039 149 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 H3BRN7 92 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 THAP8Q8NA92 274 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 Q8TCH9 128 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 PTPRSQ13332 1948 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 NDUFS8O00217 210 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 NDUFS7O75251 213 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 IGHV3-11P01762 117 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 COX6CP09669 75 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 GDF5OSQ5U4N7 250 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 CLEC2AQ6UVW9 174 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 SMPXQ9UHP9 88 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 KIF26BQ2KJY2 2108 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 DGAT2L7PQ6IED9 249 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 NUP37Q8NFH4 326 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 GTSF1Q8WW33 167 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 SS18L2Q9UHA2 77 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 THADAQ6YHU6 1953 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 CD7P09564 240 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 WT1-ASQ06250 92 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 MEIG1Q5JSS6 88 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 FAM120AOSQ5T036 256 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 NEGR1Q7Z3B1 354 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 DLX4Q92988 240 aaPredicted RBP3.99□□□□□ -1.77
SYNE2-223ENST00000557005 VCX2Q9H322 139 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 SIGLEC9Q9Y336 463 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 MPDZO75970 2070 aa3.99□□□□□ -1.77
SYNE2-223ENST00000557005 GAGE12HA6NDE8 117 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 DEFB125Q8N687 156 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 MRAP2Q96G30 205 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 DPM3Q9P2X0 92 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 LINC00527Q9UJ94 153 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 CPAMD8Q8IZJ3 1885 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 TRBV19A0A075B6N1 114 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 H3BMG7 143 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 Q8N8P6 123 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 GEMIN7Q9H840 131 aaKnown RBP3.98□□□□□ -1.77
SYNE2-223ENST00000557005 COLQQ9Y215 455 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-223ENST00000557005 PAX1P15863 534 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 COL8A2P25067 703 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 TCF15Q12870 199 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 ATXN8Q156A1 80 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 LGALS9BQ3B8N2 356 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 CT83Q5H943 113 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 LGALS9CQ6DKI2 356 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 RNF138Q8WVD3 245 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 VGLL1Q99990 258 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 TMEM238C9JI98 176 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 G3V4G9 280 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 CEACAM4O75871 244 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 PPP1R17O96001 155 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 C14orf178Q8N769 122 aaPredicted RBP3.98□□□□□ -1.77
SYNE2-223ENST00000557005 NOTCH4Q99466 2003 aa3.98□□□□□ -1.77
SYNE2-223ENST00000557005 A0A087WWL8 130 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 A0A0G2JNJ9 132 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 F8W1H4 67 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 HLA-DMBP28068 263 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 FAM106AQ4KMX7 169 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 UTF1Q5T230 341 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 ZC2HC1BQ5TFG8 222 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 Q8NFD4 153 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 DYNLRB2Q8TF09 96 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 CFHR4Q92496 578 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 Q9UFV3 132 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 FREM3P0C091 2139 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 CD28P10747 220 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 HLA-DRB4P13762 266 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 C3orf36Q3SXR2 165 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 C1orf229Q6ZS94 237 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-223ENST00000557005 HLA-DRB4X5D2U9 266 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 PPBPP02775 128 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 CD59P13987 128 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 TMEM249Q2WGJ8 235 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 C19orf54Q5BKX5 351 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 AMTNQ6UX39 209 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 ZNF503Q96F45 646 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 SLC50A1Q9BRV3 221 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 GATA1P15976 413 aaPredicted RBP3.97□□□□□ -1.77
SYNE2-223ENST00000557005 SLC25A16P16260 332 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 ZNF747Q9BV97 191 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 C15orf32Q32M92 178 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 TEX36Q5VZQ5 186 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 PATE2Q6UY27 113 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 TMEM219Q86XT9 240 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 DUX3Q96PT4 197 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 SRSF8Q9BRL6 282 aaKnown RBP3.97□□□□□ -1.77
SYNE2-223ENST00000557005 PIMREGQ9BSJ6 248 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 NPFFR1Q9GZQ6 430 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 ERG28Q9UKR5 140 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 TNFRSF18Q9Y5U5 241 aa3.97□□□□□ -1.77
SYNE2-223ENST00000557005 TRAV21A0A0B4J279 112 aa3.96□□□□□ -1.77
SYNE2-223ENST00000557005 SPRY2O43597 315 aa3.96□□□□□ -1.77
SYNE2-223ENST00000557005 C12orf74Q32Q52 190 aa3.96□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms