RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 ADARB2-AS1A8MUL3 147 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 ZNF106Q9H2Y7 1883 aaKnown RBP13.85□□□□□ -0.19
PTPN21-208ENST00000556564 COTL1Q14019 142 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 VPS25Q9BRG1 176 aa13.85□□□□□ -0.19
PTPN21-208ENST00000556564 ALPK3Q96L96 1907 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 ROS1P08922 2347 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 E9PQ18 207 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 FGF16O43320 207 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 ATP5LO75964 103 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 FAM19A2Q8N3H0 131 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 DEFB136Q30KP8 78 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 MCRIP2Q9BUT9 160 aaKnown RBP13.84□□□□□ -0.19
PTPN21-208ENST00000556564 VCX2Q9H322 139 aa13.84□□□□□ -0.19
PTPN21-208ENST00000556564 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.84□□□□□ -0.19
PTPN21-208ENST00000556564 TSSC4Q9Y5U2 329 aaPredicted RBP13.84□□□□□ -0.19
PTPN21-208ENST00000556564 CD28P10747 220 aa13.83□□□□□ -0.19
PTPN21-208ENST00000556564 ADMP35318 185 aa13.83□□□□□ -0.19
PTPN21-208ENST00000556564 SPINK13Q1W4C9 94 aa13.83□□□□□ -0.19
PTPN21-208ENST00000556564 COPS9Q8WXC6 57 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 C11orf68Q9H3H3 251 aaKnown RBP13.83□□□□□ -0.2
PTPN21-208ENST00000556564 LOC107984156A0A0G2JMH3 177 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 ARL17AQ8IVW1 177 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 KRTAP27-1Q3LI81 207 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 HIST2H2BCQ6DN03 193 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 LYZL1Q6UWQ5 148 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 TSKUQ8WUA8 353 aa13.83□□□□□ -0.2
PTPN21-208ENST00000556564 MST1LQ2TV78 715 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 RPLP1P05386 114 aaKnown RBP13.82□□□□□ -0.2
PTPN21-208ENST00000556564 IGKV1-39P01597 117 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 IGKV1D-39P04432 117 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 SMIM6P0DI80 62 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 PKIAP61925 76 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 KLK9Q9UKQ9 250 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 NDUFA4O00483 81 aa13.82□□□□□ -0.2
PTPN21-208ENST00000556564 SRSF1Q07955 248 aaKnown RBP eCLIP13.82□□□□□ -0.2
PTPN21-208ENST00000556564 A0A087WX48 190 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 NCR2O95944 276 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 WT1-ASQ06250 92 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 HINT1P49773 126 aaPredicted RBP13.81□□□□□ -0.2
PTPN21-208ENST00000556564 YPEL3P61236 119 aaPredicted RBP13.81□□□□□ -0.2
PTPN21-208ENST00000556564 TRAV9-1A0A075B6T8 112 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 A0A087WWC5 75 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 ELANEP08246 267 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 ANAPC10Q9UM13 185 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
PTPN21-208ENST00000556564 FNDC10F2Z333 226 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 PSCAO43653 123 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 HOXA5P20719 270 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 A0A087WWL8 130 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 ABCA4P78363 2273 aa13.8□□□□□ -0.2
PTPN21-208ENST00000556564 COX6CP09669 75 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 ZFP36P26651 326 aaKnown RBP13.79□□□□□ -0.2
PTPN21-208ENST00000556564 LYPD1Q8N2G4 141 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 OR11H6Q8NGC7 330 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 GTF3C1Q12789 2109 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 C8orf86Q6ZUL3 223 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 CCL24O00175 119 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 NBASA2RRP1 2371 aa13.79□□□□□ -0.2
PTPN21-208ENST00000556564 RPL36AP83881 106 aaKnown RBP13.79□□□□□ -0.2
PTPN21-208ENST00000556564 JOSD1Q15040 202 aaPredicted RBP13.79□□□□□ -0.2
PTPN21-208ENST00000556564 RPL36ALQ969Q0 106 aaKnown RBP13.79□□□□□ -0.2
PTPN21-208ENST00000556564 ZNF876PQ49A33 203 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 A8MXK9 166 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 TTC9CQ8N5M4 171 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
PTPN21-208ENST00000556564 PHLDA1Q8WV24 401 aaPredicted RBP13.78□□□□□ -0.2
PTPN21-208ENST00000556564 C8orf49Q96NF6 230 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 TRAV12-2A0A075B6T6 113 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 APOC4P55056 127 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 SLC25A34Q6PIV7 304 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 SLC25A2Q9BXI2 301 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 CYSLTR1Q9Y271 337 aa13.78□□□□□ -0.2
PTPN21-208ENST00000556564 MUC22E2RYF6 1773 aaPredicted RBP13.78□□□□□ -0.2
PTPN21-208ENST00000556564 F5H768 121 aa13.77□□□□□ -0.2
PTPN21-208ENST00000556564 SNAI2O43623 268 aa13.77□□□□□ -0.2
PTPN21-208ENST00000556564 DAD1P61803 113 aa13.77□□□□□ -0.2
PTPN21-208ENST00000556564 PCNX1Q96RV3 2341 aa13.77□□□□□ -0.2
PTPN21-208ENST00000556564 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
PTPN21-208ENST00000556564 LINC00479Q96M42 142 aa13.77□□□□□ -0.21
PTPN21-208ENST00000556564 AKAP6Q13023 2319 aa13.77□□□□□ -0.21
PTPN21-208ENST00000556564 RITA1Q96K30 269 aa13.77□□□□□ -0.21
PTPN21-208ENST00000556564 IGHV3-64A0A075B6Q5 118 aa13.76□□□□□ -0.21
PTPN21-208ENST00000556564 SSBP2P81877 361 aaPredicted RBP13.76□□□□□ -0.21
PTPN21-208ENST00000556564 BLCAPP62952 87 aa13.76□□□□□ -0.21
PTPN21-208ENST00000556564 FBXL19-AS1Q494R0 122 aa13.76□□□□□ -0.21
PTPN21-208ENST00000556564 ATRAIDQ6UW56 229 aa13.76□□□□□ -0.21
PTPN21-208ENST00000556564 SPTBN1Q01082 2364 aaKnown RBP13.76□□□□□ -0.21
PTPN21-208ENST00000556564 PCDH15Q96QU1 1955 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 SLURP1P55000 103 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 Q86TA4 180 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 IGHV3-16A0A0C4DH30 117 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 IGHV7-4-1A0A0J9YVY3 117 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 HOXD3P31249 432 aaPredicted RBP13.75□□□□□ -0.21
PTPN21-208ENST00000556564 CDX1P47902 265 aaPredicted RBP13.75□□□□□ -0.21
PTPN21-208ENST00000556564 ST6GALNAC6Q969X2 333 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 PARD6GQ9BYG4 376 aaPredicted RBP13.75□□□□□ -0.21
PTPN21-208ENST00000556564 D6R8Y8 96 aa13.75□□□□□ -0.21
PTPN21-208ENST00000556564 C8orf31Q8N9H6 132 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms