RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 WDFY4Q6ZS81 3184 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 ABCA4P78363 2273 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 TRAV3A0A0B4J244 114 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 IGHV1-3A0A0C4DH29 117 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 A6NDN8 102 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 NCBP2LA6PVI3 153 aaKnown RBP3.92□□□□□ -1.78
SRP54-211ENST00000556445 CA2P00918 260 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 IGKV1-16P04430 117 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 BCL2P10415 239 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 PAX1P15863 534 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 GALR1P47211 349 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 RPL29P47914 159 aaKnown RBP3.92□□□□□ -1.78
SRP54-211ENST00000556445 PSMB3P49720 205 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 SELENOTP62341 195 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 AKR1C1Q04828 323 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 RHEBQ15382 184 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 NSUN5P1Q3KNT7 163 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 C12orf54Q6X4T0 127 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 FAM19A5Q7Z5A7 132 aaPredicted RBP3.92□□□□□ -1.78
SRP54-211ENST00000556445 TMEM144Q7Z5S9 345 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 PNKDQ8N490 385 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 OR10G9Q8NGN4 311 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 OR10G7Q8NGN6 311 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 SLC35E1Q96K37 410 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 C20orf144Q9BQM9 153 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 NDUFA4L2Q9NRX3 87 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 THYN1Q9P016 225 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 VAX2Q9UIW0 290 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 TP53TG1Q9Y2A0 90 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 PIEZO2Q9H5I5 2752 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 MUC3AQ02505 3323 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 HIVEP3Q5T1R4 2406 aa3.92□□□□□ -1.78
SRP54-211ENST00000556445 B4DEV8 164 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 TMEM250H0YL14 139 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 LY6LH3BQJ8 138 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 HMGB3O15347 200 aaKnown RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 NUPL2O15504 423 aaKnown RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 CXorf1O96002 111 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 IGLV2-23P01705 113 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 RBMY1CP0DJD4 496 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 RNASE2P10153 161 aaKnown RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 RPL27AP46776 148 aaKnown RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 REG1BP48304 166 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 DLX1P56177 255 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 TAS2R45P59539 299 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 LMO4P61968 165 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 RHOBP62745 196 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 BTN1A1Q13410 526 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 PLGLAQ15195 96 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 PRSS8Q16651 343 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 C4orf26Q17RF5 130 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 SPINK9Q5DT21 86 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 TET2Q6N021 2002 aaPredicted RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 LCN15Q6UWW0 184 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 SLC35E3Q7Z769 313 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 OR4P4Q8NGL7 312 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 OR2T10Q8NGZ9 312 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 CLDND2Q8NHS1 167 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 SCRT1Q9BWW7 348 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 TUBA4BQ9H853 241 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 ZNF430Q9H8G1 570 aaPredicted RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 SMCO4Q9NRQ5 59 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 GNG13Q9P2W3 67 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
SRP54-211ENST00000556445 SPTBN1Q01082 2364 aaKnown RBP3.91□□□□□ -1.78
SRP54-211ENST00000556445 TPRP12270 2363 aaKnown RBP3.9□□□□□ -1.78
SRP54-211ENST00000556445 A0A0C4DFX4 3053 aa3.9□□□□□ -1.78
SRP54-211ENST00000556445 SPEGQ15772 3267 aa3.9□□□□□ -1.78
SRP54-211ENST00000556445 SMIM9A6NGZ8 99 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 ZFP92A6NM28 416 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 ODF3BA8MYP8 253 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 F6UB75 175 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 F6UZH7 168 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 PDE6DO43924 150 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 SCO1O75880 301 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 GAS8-AS1O95177 125 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 VENTXO95231 258 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 MOSP00540 346 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 SRP19P09132 144 aaKnown RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 FBP1P09467 338 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 ADCYAP1P18509 176 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 COX7A1P24310 79 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 PAX6P26367 422 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 BRS3P32247 399 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 RPL19P84098 196 aaKnown RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 MEF2BQ02080 365 aaPredicted RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 PPP1R27Q86WC6 154 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 RPP25LQ8N5L8 163 aaKnown RBP3.9□□□□□ -1.79
SRP54-211ENST00000556445 Q8N7P7 452 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 NPBQ8NG41 125 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 OR1P1Q8NH06 330 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 RXFP4Q8TDU9 374 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 TVP23CQ96ET8 276 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 C9orf85Q96MD7 179 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 PFDN5Q99471 154 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 CCL19Q99731 98 aa3.9□□□□□ -1.79
SRP54-211ENST00000556445 GGTLC1Q9BX51 225 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms