RNA–Protein interactions for RNA: ENST00000556356.1

LRP1-211, Transcript of LDL receptor related protein 1, humanhuman

TSL 2

Gene LRP1, Length 5,114 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-211ENST00000556356 SMIM6P0DI80 62 aa12.17□□□□□ -0.46
LRP1-211ENST00000556356 C1QL4Q86Z23 238 aa12.17□□□□□ -0.46
LRP1-211ENST00000556356 ALKBH7Q9BT30 221 aaPredicted RBP12.17□□□□□ -0.46
LRP1-211ENST00000556356 MRPL27Q9P0M9 148 aaKnown RBP12.17□□□□□ -0.46
LRP1-211ENST00000556356 UBE2DNLQ8IWF7 75 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 IGF2RP11717 2491 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 PGPEP1LA6NFU8 196 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 TCTAP57738 103 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 Q8TAT8 98 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 TMEM70Q9BUB7 260 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 WIPF3A6NGB9 483 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 A8MXK9 166 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 LOXL1Q08397 574 aaPredicted RBP12.16□□□□□ -0.46
LRP1-211ENST00000556356 MST1LQ2TV78 715 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 TSKUQ8WUA8 353 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 SCGB3A1Q96QR1 104 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 PRSS2P07478 247 aa12.16□□□□□ -0.46
LRP1-211ENST00000556356 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
LRP1-211ENST00000556356 CIRBPQ14011 172 aaKnown RBP12.16□□□□□ -0.46
LRP1-211ENST00000556356 ATP5LO75964 103 aa12.15□□□□□ -0.46
LRP1-211ENST00000556356 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
LRP1-211ENST00000556356 MEIG1Q5JSS6 88 aa12.15□□□□□ -0.46
LRP1-211ENST00000556356 PPBPP02775 128 aa12.15□□□□□ -0.47
LRP1-211ENST00000556356 NUDT10Q8NFP7 164 aa12.15□□□□□ -0.47
LRP1-211ENST00000556356 NUDT11Q96G61 164 aa12.15□□□□□ -0.47
LRP1-211ENST00000556356 PAM16Q9Y3D7 125 aa12.15□□□□□ -0.47
LRP1-211ENST00000556356 IMMP2LQ96T52 175 aa12.14□□□□□ -0.47
LRP1-211ENST00000556356 C7orf71A4D174 169 aa12.14□□□□□ -0.47
LRP1-211ENST00000556356 FOXE3Q13461 319 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 NPBQ8NG41 125 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 COPS9Q8WXC6 57 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 LBHQ53QV2 105 aaPredicted RBP12.13□□□□□ -0.47
LRP1-211ENST00000556356 GTF2H5Q6ZYL4 71 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 LGALS1P09382 135 aaKnown RBP12.13□□□□□ -0.47
LRP1-211ENST00000556356 OR9G4Q8NGQ1 327 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 C18orf15Q96N68 181 aa12.13□□□□□ -0.47
LRP1-211ENST00000556356 SH2D1AO60880 128 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 PET117Q6UWS5 81 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 PAX9P55771 341 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 C5orf52A6NGY3 159 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 H3BRM9 83 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 SRSF3P84103 164 aaKnown RBP12.12□□□□□ -0.47
LRP1-211ENST00000556356 TMEM170BQ5T4T1 132 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 ZNF414Q96IQ9 312 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 CRPP02741 224 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 CHCHD5Q9BSY4 110 aa12.12□□□□□ -0.47
LRP1-211ENST00000556356 IGHV7-4-1A0A0J9YVY3 117 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 A0A1B0GW64 132 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 RPLP1P05386 114 aaKnown RBP12.11□□□□□ -0.47
LRP1-211ENST00000556356 CCL24O00175 119 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 APOC4P55056 127 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 TMEM95Q3KNT9 176 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 IFI27P40305 119 aaPredicted RBP12.11□□□□□ -0.47
LRP1-211ENST00000556356 XCL2Q9UBD3 114 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 TRAV8-1A0A0A6YYK1 113 aa12.11□□□□□ -0.47
LRP1-211ENST00000556356 FREM1Q5H8C1 2179 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 RPL36AP83881 106 aaKnown RBP12.1□□□□□ -0.47
LRP1-211ENST00000556356 ERCC8Q13216 396 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 Q8N7P7 452 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 RPL36ALQ969Q0 106 aaKnown RBP12.1□□□□□ -0.47
LRP1-211ENST00000556356 SIRPDQ9H106 197 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 IGLC7A0M8Q6 106 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 A6NDN8 102 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 IGLC1P0CG04 106 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 SSBP4Q9BWG4 385 aaPredicted RBP12.1□□□□□ -0.47
LRP1-211ENST00000556356 CA1P00915 261 aaPredicted RBP12.1□□□□□ -0.47
LRP1-211ENST00000556356 BLCAPP62952 87 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 ATP5L2Q7Z4Y8 100 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 RNF182Q8N6D2 247 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 IGHV7-81A0A0B4J1V7 117 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 C8orf86Q6ZUL3 223 aa12.1□□□□□ -0.47
LRP1-211ENST00000556356 PTPN13Q12923 2485 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 H3BRN7 92 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 GZMBP10144 247 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 RAB37Q96AX2 223 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 HIVEP2P31629 2446 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 TMEM238LA0A1B0GVL6 79 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 A6NJY4 79 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.09□□□□□ -0.47
LRP1-211ENST00000556356 IGHV3-53P01767 116 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 HOXD3P31249 432 aaPredicted RBP12.09□□□□□ -0.47
LRP1-211ENST00000556356 NXT2Q9NPJ8 142 aaKnown RBP12.09□□□□□ -0.47
LRP1-211ENST00000556356 LY96Q9Y6Y9 160 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 THAP8Q8NA92 274 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 TMEM160Q9NX00 188 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 PLCE1Q9P212 2302 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 TRBV19A0A075B6N1 114 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 SRSF1Q07955 248 aaKnown RBP eCLIP12.09□□□□□ -0.47
LRP1-211ENST00000556356 CFAP161Q6P656 301 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 PRSS57Q6UWY2 283 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 Q86TA4 180 aa12.09□□□□□ -0.47
LRP1-211ENST00000556356 C22orf34Q6ZV56 151 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 LYPD6Q86Y78 171 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 DERL1Q9BUN8 251 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 RIPPLY3P57055 190 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 VCX2Q9H322 139 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 A0A087WX48 190 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 LMO4P61968 165 aa12.08□□□□□ -0.48
LRP1-211ENST00000556356 CYSLTR1Q9Y271 337 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms