RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 OR4K15Q8NH41 348 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 ZNF431Q8TF32 576 aaPredicted RBP0.4□□□□□ -2.35
SCFD1-218ENST00000556256 AP3S1Q92572 193 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 OR52A1Q9UKL2 312 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 NUP98P52948 1817 aa0.4□□□□□ -2.35
SCFD1-218ENST00000556256 MYH10P35580 1976 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 PHRF1Q9P1Y6 1649 aaKnown RBP0.39□□□□□ -2.35
SCFD1-218ENST00000556256 ALPK3Q96L96 1907 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 K7ERJ3 54 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 PIAS1O75925 651 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 GNG3P63215 75 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 BASP1P80723 227 aaKnown RBP0.39□□□□□ -2.35
SCFD1-218ENST00000556256 KLRD1Q13241 179 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 POU6F1Q14863 301 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 MSMO1Q15800 293 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 SNCBQ16143 134 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 GLIPR1L1Q6UWM5 242 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 SMIM20Q8N5G0 67 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 OR13C6PQ8NH95 151 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 PSMF1Q92530 271 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 PLEKHB2Q96CS7 222 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 MALSU1Q96EH3 234 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 CARD19Q96LW7 228 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 ZNF714Q96N38 554 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 RTL8AQ9BWD3 113 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 TMEM138Q9NPI0 162 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 STOML2Q9UJZ1 356 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 RNF11Q9Y3C5 154 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 FRMPD1Q5SYB0 1578 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 EML5Q05BV3 1969 aa0.39□□□□□ -2.35
SCFD1-218ENST00000556256 CD109Q6YHK3 1445 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 DOCK4Q8N1I0 1966 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 CASP8AP2Q9UKL3 1982 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 NCAPD3P42695 1498 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 hDV103S1A0JD37 113 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 ODAMA1E959 279 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 OR2T8A6NH00 312 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 TMEM238C9JI98 176 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 RER1O15258 196 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 IGLV3-1P01715 115 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 APOA2P02652 100 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 LTC4SQ16873 150 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 CDC26Q8NHZ8 85 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 PRRT1Q99946 306 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 PBDC1Q9BVG4 233 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 UFC1Q9Y3C8 167 aa0.38□□□□□ -2.35
SCFD1-218ENST00000556256 JMJD7-PLA2G4BH0Y9G9 81 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 HIST1H2BKO60814 126 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 IFNA4P05014 189 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 HIST1H2BJP06899 126 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 IDO1P14902 403 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 TAS2R41P59536 307 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 HBBP68871 147 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 FKBP1CQ5VVH2 108 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 LRRC18Q8N456 261 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 MAP1LC3BQ9GZQ8 125 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 BOLA2Q9H3K6 86 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 C10orf95Q9H7T3 257 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 COL24A1Q17RW2 1714 aa0.37□□□□□ -2.35
SCFD1-218ENST00000556256 C9orf170A2RU37 121 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 C5orf67F2Z3F1 127 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 K7EIL1 84 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 PPYP01298 95 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 IGHV3-33P01772 117 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 VBP1P61758 197 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 EIF3IQ13347 325 aaKnown RBP0.36□□□□□ -2.35
SCFD1-218ENST00000556256 RTL8BQ17RB0 113 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 OR10AC1Q8NH08 325 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 HOPXQ9BPY8 73 aaPredicted RBP0.36□□□□□ -2.35
SCFD1-218ENST00000556256 OR2H1Q9GZK4 316 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 WFDC10AQ9H1F0 79 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 HSPB8Q9UJY1 196 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 ANKRD17O75179 2603 aaKnown RBP0.36□□□□□ -2.35
SCFD1-218ENST00000556256 UBR2Q8IWV8 1755 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 KMT2DO14686 5537 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 UNC13CQ8NB66 2214 aa0.36□□□□□ -2.35
SCFD1-218ENST00000556256 CAMSAP2Q08AD1 1489 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 FREM3P0C091 2139 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 MGAMO43451 1857 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 RTL9Q8NET4 1388 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 GPR31O00270 319 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 GLRXP35754 106 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 CRYBA4P53673 196 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 FOXA3P55318 350 aaPredicted RBP0.35□□□□□ -2.35
SCFD1-218ENST00000556256 MIR22HGQ0VDD5 57 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 KRTAP21-1Q3LI58 79 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 SPATA45Q537H7 98 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 FOXI2Q6ZQN5 318 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 PRR15Q8IV56 129 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 IFT20Q8IY31 132 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 LINC00269Q8N2A0 174 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 FAM216BQ8N7L0 139 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 TAF9BQ9HBM6 251 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 OTORQ9NRC9 128 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 SIP14410 1827 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 ERBINQ96RT1 1412 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 SNRNP200O75643 2136 aaKnown RBP0.35□□□□□ -2.35
SCFD1-218ENST00000556256 TET1Q8NFU7 2136 aa0.35□□□□□ -2.35
SCFD1-218ENST00000556256 HEATR1Q9H583 2144 aaKnown RBP0.35□□□□□ -2.35
SCFD1-218ENST00000556256 MED12Q93074 2177 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms