RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 TMEM170AQ8WVE7 144 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 SEC22AQ96IW7 307 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 TMEM56Q96MV1 263 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 SLC5A7Q9GZV3 580 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 COPZ2Q9P299 210 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 RCL1Q9Y2P8 373 aaKnown RBP4.72□□□□□ -1.65
ATXN3-236ENST00000556220 NSG2Q9Y328 171 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 HLA-DRB4X5D2U9 266 aa4.72□□□□□ -1.65
ATXN3-236ENST00000556220 A0A0B4J2A0 478 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 FAM90A26D6RGX4 464 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 PRAF2O60831 178 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 C1QBP02746 253 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 PGAM2P15259 253 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 NKX2-1P43699 371 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-236ENST00000556220 INPP1P49441 399 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 EIF2B2P49770 351 aaKnown RBP4.71□□□□□ -1.66
ATXN3-236ENST00000556220 AP2S1P53680 142 aaPredicted RBP4.71□□□□□ -1.66
ATXN3-236ENST00000556220 FXYD7P58549 80 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 LINC00315P59091 139 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 ARPC4P59998 168 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 ERVK-16P61578 105 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 CATR1Q13166 79 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 RRN3P1Q2M238 152 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM128Q5BJH2 165 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 C1orf158Q8N1D5 194 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 SLC35G3Q8N808 338 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 OR4D5Q8NGN0 318 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 PINX1Q96BK5 328 aaKnown RBP4.71□□□□□ -1.66
ATXN3-236ENST00000556220 GPR146Q96CH1 333 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 NARS2Q96I59 477 aaKnown RBP4.71□□□□□ -1.66
ATXN3-236ENST00000556220 UPK3BQ9BT76 320 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM222Q9H0R3 208 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 WFDC1Q9HC57 220 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 ZNF586Q9NXT0 402 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 FKBP11Q9NYL4 201 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 COMMD9Q9P000 198 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 SHPKQ9UHJ6 478 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 SCP2D1Q9UJQ7 156 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 GOLT1BQ9Y3E0 138 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM56-RWDD3S4R434 201 aa4.71□□□□□ -1.66
ATXN3-236ENST00000556220 TEX13DA0A0J9YY54 714 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-236ENST00000556220 LYRM9A8MSI8 78 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 CENPXA8MT69 81 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 GPR31O00270 319 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 SNAPC5O75971 98 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 CDS2O95674 445 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 IGKV3-20P01619 116 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 HOXB5P09067 269 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 GIPP09681 153 aaPredicted RBP4.7□□□□□ -1.66
ATXN3-236ENST00000556220 DEFB130BP0DP73 79 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 DEFB130AP0DP74 79 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 F2RP25116 425 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 FAUP35544 74 aaKnown RBP4.7□□□□□ -1.66
ATXN3-236ENST00000556220 ERVFC1-1P60608 527 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 TSPAN5P62079 268 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 HAMPP81172 84 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 ARL16Q0P5N6 197 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 ARL6IP1Q15041 203 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 GDF5OSQ5U4N7 250 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 ZNF709Q8N972 641 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 ZNF114Q8NC26 417 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 OR51H1Q8NH63 302 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 OR1S1Q8NH92 325 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 DEFB104AQ8WTQ1 72 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 MED28Q9H204 178 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 CYTL1Q9NRR1 136 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 PRNDQ9UKY0 176 aa4.7□□□□□ -1.66
ATXN3-236ENST00000556220 C3orf85A0A1B0GTC6 90 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 PFDN1O60925 122 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 MBPP02686 304 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-236ENST00000556220 ATP5G1P05496 136 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 ATP5G3P48201 142 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 ESRGQ1W209 222 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 C16orf54Q6UWD8 224 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 NOXA1Q86UR1 476 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 ZBTB8BQ8NAP8 495 aaPredicted RBP4.69□□□□□ -1.66
ATXN3-236ENST00000556220 OR2T35Q8NGX2 323 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 ZFAND1Q8TCF1 268 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 UHRF2Q96PU4 802 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 MAGT1Q9H0U3 335 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 TNXBP22105 4242 aa4.69□□□□□ -1.66
ATXN3-236ENST00000556220 IGSF23A1L1A6 192 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 CBY3A6NI87 242 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 PMS2P5A8MQ11 134 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 K7EPK0 472 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 SSNA1O43805 119 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 CLN5O75503 358 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 KRASP01116 189 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 ANXA3P12429 323 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 G6PCP35575 357 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 LPAR6P43657 344 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 DEFB1P60022 68 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 HERV-K104P61576 105 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 VAMP2P63027 116 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 ERHP84090 104 aaKnown RBP4.68□□□□□ -1.66
ATXN3-236ENST00000556220 PSG9Q00887 426 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 AARDQ4LEZ3 155 aa4.68□□□□□ -1.66
ATXN3-236ENST00000556220 TMEM268Q5VZI3 342 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms