RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 LINC00473A8K010 186 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 J3QKU1 62 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 COLCA2A8K830 154 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 RPL15P61313 204 aaKnown RBP8.67□□□□□ -1.02
ACTN1-216ENST00000556083 EDA2RQ9HAV5 297 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.67□□□□□ -1.02
ACTN1-216ENST00000556083 FCN3O75636 299 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 CACNA1DQ01668 2161 aa8.67□□□□□ -1.02
ACTN1-216ENST00000556083 TRAV5A0A0B4J249 113 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 VWC2LB2RUY7 222 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 SYS1-DBNDD2H3BUS1 97 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 EXOC3-AS1Q8N2X6 119 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 GBF1Q92538 1859 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 TRAV12-3A0A0B4J271 114 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 CD24P25063 80 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 MUC21A0A0G2JKD1 596 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 MUC21A0A140T8X8 626 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 K7EM74 188 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 TNFRSF6BO95407 300 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 GAGE2BQ13066 116 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 GAGE2EQ4V326 116 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 GAGE2DQ9UEU5 116 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 I3L3M4 83 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 IGHV2-70P01814 119 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 MST1LQ2TV78 715 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 PRIMA1Q86XR5 153 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 Q8N8P6 123 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 PYGO2Q9BRQ0 406 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 LSM4Q9Y4Z0 139 aaKnown RBP8.66□□□□□ -1.02
ACTN1-216ENST00000556083 LTBP1Q14766 1721 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 CACNA1EQ15878 2313 aa8.66□□□□□ -1.02
ACTN1-216ENST00000556083 A0A1W2PPI3 338 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 COL8A2P25067 703 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 MESP1Q9BRJ9 268 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 TRBV19A0A075B6N1 114 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 IGHV1OR15-1A0A075B7D0 117 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 H3BQ85 93 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 OVOL3O00110 214 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 CD5LO43866 347 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 TMEM95Q3KNT9 176 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 Q5PR19 223 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 TMEM219Q86XT9 240 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 C20orf78Q9BR46 151 aa8.65□□□□□ -1.02
ACTN1-216ENST00000556083 TAL2Q16559 108 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 OR11H6Q8NGC7 330 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 CHD5Q8TDI0 1954 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 CNOT1A5YKK6 2376 aaKnown RBP8.65□□□□□ -1.03
ACTN1-216ENST00000556083 SELLP14151 372 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 DAD1P61803 113 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 SSBP2P81877 361 aaPredicted RBP8.65□□□□□ -1.03
ACTN1-216ENST00000556083 KLRD1Q13241 179 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 VSIRQ9H7M9 311 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 LAMTOR3Q9UHA4 124 aa8.65□□□□□ -1.03
ACTN1-216ENST00000556083 THADAQ6YHU6 1953 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 MMP23AO75900 390 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 CDKN1BP46527 198 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 FOXE3Q13461 319 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 KLF2Q9Y5W3 355 aaPredicted RBP8.64□□□□□ -1.03
ACTN1-216ENST00000556083 ALPK2Q86TB3 2170 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 ACACAQ13085 2346 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 SBF1O95248 1867 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 RBAKDNA6NC62 111 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 ZNF561-AS1K7EIQ3 104 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 IGHV4-39P01824 125 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 EVI2AP22794 236 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 DEFB131AP59861 70 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 THAP8Q8NA92 274 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 Q8NFD4 153 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 C1orf159Q96HA4 380 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 CEP250Q9BV73 2442 aa8.64□□□□□ -1.03
ACTN1-216ENST00000556083 PMVKQ15126 192 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 FAM104BQ5XKR9 115 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 TMEM158Q8WZ71 300 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 PIP4P1Q86T03 277 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 DICER1Q9UPY3 1922 aaKnown RBP8.63□□□□□ -1.03
ACTN1-216ENST00000556083 GVINP1Q7Z2Y8 2422 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 PPIFP30405 207 aaKnown RBP8.63□□□□□ -1.03
ACTN1-216ENST00000556083 C2orf82Q6UX34 121 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 SCN8AQ9UQD0 1980 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 PRSS47A8MTI9 375 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 ZFAND6Q6FIF0 208 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 BRD3OSQ6XYD6 125 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 C14orf178Q8N769 122 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-216ENST00000556083 GATD1Q8NB37 220 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 C11orf52Q96A22 123 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 ZNF48Q96MX3 618 aaPredicted RBP8.63□□□□□ -1.03
ACTN1-216ENST00000556083 TMEM243Q9BU79 118 aa8.63□□□□□ -1.03
ACTN1-216ENST00000556083 H3BRN7 92 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 ZC2HC1BQ5TFG8 222 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 ATRAIDQ6UW56 229 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 GREB1Q4ZG55 1949 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 TRAV3A0A0B4J244 114 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 ATP6V0E1O15342 81 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 LOXP28300 417 aaPredicted RBP8.62□□□□□ -1.03
ACTN1-216ENST00000556083 SYNJ2BPP57105 145 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 UTF1Q5T230 341 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 ST6GALNAC6Q969X2 333 aa8.62□□□□□ -1.03
ACTN1-216ENST00000556083 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms