RNA–Protein interactions for RNA: ENST00000555964.5

XRCC3-215, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-215ENST00000555964 HOXB5P09067 269 aa11.84□□□□□ -0.51
XRCC3-215ENST00000555964 OR5G3P0C626 314 aa11.84□□□□□ -0.51
XRCC3-215ENST00000555964 BTF3P20290 206 aaKnown RBP11.84□□□□□ -0.51
XRCC3-215ENST00000555964 UBE2MP61081 183 aaKnown RBP11.84□□□□□ -0.51
XRCC3-215ENST00000555964 FCN2Q15485 313 aa11.84□□□□□ -0.51
XRCC3-215ENST00000555964 GNPNAT1Q96EK6 184 aaPredicted RBP11.84□□□□□ -0.51
XRCC3-215ENST00000555964 SOSTQ9BQB4 213 aa11.84□□□□□ -0.51
XRCC3-215ENST00000555964 Q9H8V8 135 aa11.84□□□□□ -0.51
XRCC3-215ENST00000555964 A0A1W2PPQ1 181 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 TNFSF8P32971 234 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 PXDC1Q5TGL8 231 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 LCN15Q6UWW0 184 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 CCDC28AQ8IWP9 274 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 Q8N1X5 172 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 MCFD2Q8NI22 146 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 RNASE8Q8TDE3 154 aaKnown RBP11.83□□□□□ -0.52
XRCC3-215ENST00000555964 RPUSD4Q96CM3 377 aaKnown RBP11.83□□□□□ -0.52
XRCC3-215ENST00000555964 SLC50A1Q9BRV3 221 aa11.83□□□□□ -0.52
XRCC3-215ENST00000555964 NOP10Q9NPE3 64 aaKnown RBP11.83□□□□□ -0.52
XRCC3-215ENST00000555964 FNDC10F2Z333 226 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 M6PRP20645 277 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 PPP1R1AQ13522 171 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 PYDC2Q56P42 97 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 SPATA12Q7Z6I5 190 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 TRIM63Q969Q1 353 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 SLIRPQ9GZT3 109 aaKnown RBP11.82□□□□□ -0.52
XRCC3-215ENST00000555964 PSENENQ9NZ42 101 aa11.82□□□□□ -0.52
XRCC3-215ENST00000555964 LRP1BQ9NZR2 4599 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 ANXA7P20073 488 aaKnown RBP11.81□□□□□ -0.52
XRCC3-215ENST00000555964 DLK1P80370 383 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 OR5I1Q13606 314 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 RXFP4Q8TDU9 374 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 UHRF2Q96PU4 802 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 UPK3BQ9BT76 320 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 Q9H3A6 140 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 MGAT4CQ9UBM8 478 aa11.81□□□□□ -0.52
XRCC3-215ENST00000555964 TRAV26-1A0A087WT03 109 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 SNURFLB1AK76 121 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 H3BNG1 76 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 K7EPK0 472 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 RLN2P04090 185 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 ID3Q02535 119 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 TEPPQ6URK8 271 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 CCDC190Q86UF4 302 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 ARL6Q9H0F7 186 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 ARV1Q9H2C2 271 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 NPVFQ9HCQ7 196 aa11.8□□□□□ -0.52
XRCC3-215ENST00000555964 POLR2GP62487 172 aaKnown RBP eCLIP11.79□□□□□ -0.52
XRCC3-215ENST00000555964 ZNF546Q86UE3 836 aa11.79□□□□□ -0.52
XRCC3-215ENST00000555964 LINC00612Q8N6U2 182 aa11.79□□□□□ -0.52
XRCC3-215ENST00000555964 OR10P1Q8NGE3 313 aa11.79□□□□□ -0.52
XRCC3-215ENST00000555964 SMIM8Q96KF7 97 aa11.79□□□□□ -0.52
XRCC3-215ENST00000555964 SCRT2Q9NQ03 307 aa11.79□□□□□ -0.52
XRCC3-215ENST00000555964 PMS2P5A8MQ11 134 aa11.78□□□□□ -0.52
XRCC3-215ENST00000555964 GOSR2O14653 212 aa11.78□□□□□ -0.52
XRCC3-215ENST00000555964 SSSCA1O60232 199 aa11.78□□□□□ -0.52
XRCC3-215ENST00000555964 RRAS2P62070 204 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-215ENST00000555964 BPIFA4PQ86YQ2 179 aa11.78□□□□□ -0.52
XRCC3-215ENST00000555964 ZNF331Q9NQX6 463 aaPredicted RBP11.78□□□□□ -0.52
XRCC3-215ENST00000555964 MRPS16Q9Y3D3 137 aaKnown RBP11.78□□□□□ -0.52
XRCC3-215ENST00000555964 PXMP4Q9Y6I8 212 aa11.78□□□□□ -0.52
XRCC3-215ENST00000555964 ZNF701M0R085 212 aaPredicted RBP11.77□□□□□ -0.53
XRCC3-215ENST00000555964 S100A5P33763 92 aa11.77□□□□□ -0.53
XRCC3-215ENST00000555964 A0A0J9YY99 117 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 H3BMQ9 156 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 MRPS12O15235 138 aaKnown RBP11.76□□□□□ -0.53
XRCC3-215ENST00000555964 METTL15P1P0C7V9 234 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 LEPP41159 167 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 TMEM14EPQ6UXP3 125 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 LINC00305Q7Z4B0 112 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 GGACTQ9BVM4 153 aa11.76□□□□□ -0.53
XRCC3-215ENST00000555964 GAGE12BA1L429 117 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 C9orf170A2RU37 121 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 COX7A2P2O60397 106 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 TSC22D2O75157 780 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 GAGE7O76087 117 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 GAGE12FP0CL80 117 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 GAGE12GP0CL81 117 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 GAGE12IP0CL82 117 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 TAS2R30P59541 319 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 SLC38A11Q08AI6 406 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 C4orf46Q504U0 113 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 GFI1BQ5VTD9 330 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 PTTG2Q9NZH5 202 aa11.75□□□□□ -0.53
XRCC3-215ENST00000555964 INPP1P49441 399 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 RAB31Q13636 194 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 PATE2Q6UY27 113 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 KRTAP1-5Q9BYS1 174 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 V9GYH0 126 aa11.74□□□□□ -0.53
XRCC3-215ENST00000555964 NAP1L6A6NFF2 107 aa11.73□□□□□ -0.53
XRCC3-215ENST00000555964 EREGO14944 169 aa11.73□□□□□ -0.53
XRCC3-215ENST00000555964 DAZ2Q13117 558 aaKnown RBP11.73□□□□□ -0.53
XRCC3-215ENST00000555964 GUK1Q16774 197 aa11.73□□□□□ -0.53
XRCC3-215ENST00000555964 ESRGQ1W209 222 aa11.73□□□□□ -0.53
XRCC3-215ENST00000555964 AGPAT2O15120 278 aa11.72□□□□□ -0.53
XRCC3-215ENST00000555964 SCGB1D2O95969 90 aa11.72□□□□□ -0.53
XRCC3-215ENST00000555964 HOXA5P20719 270 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms