RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SYS1-DBNDD2H3BUS1 97 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 CRXO43186 299 aaPredicted RBP5.53□□□□□ -1.52
TDP1-213ENST00000555880 SFTPCP11686 197 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 FCGR2BP31994 310 aaPredicted RBP5.53□□□□□ -1.52
TDP1-213ENST00000555880 CSN1S1P47710 185 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 PDE6HQ13956 83 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 PSG3Q16557 428 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 FBXL19-AS1Q494R0 122 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 LY6G5BQ8NDX9 201 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 NPBQ8NG41 125 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 ZC2HC1AQ96GY0 325 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 MAP1LC3CQ9BXW4 147 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 TMEM191AQ9H0A3 160 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 ST20Q9HBF5 79 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 C1RLQ9NZP8 487 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 PSG8Q9UQ74 426 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 LAMA5O15230 3695 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 ADGRG4Q8IZF6 3080 aa5.53□□□□□ -1.52
TDP1-213ENST00000555880 SERTM2A0A1B0GWG4 89 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 OR4C46A6NHA9 309 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 SH2D7A6NKC9 451 aaPredicted RBP5.52□□□□□ -1.53
TDP1-213ENST00000555880 M0QZ24 198 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 M0R1W7 72 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 S100A7P31151 101 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 TFPI2P48307 235 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 MFAP4P55083 255 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 ARF6P62330 175 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 PSG9Q00887 426 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 C5orf64Q2M2E5 130 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 MAJINQ3KP22 176 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 CCDC144NLQ6NUI1 221 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 C16orf54Q6UWD8 224 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 SIGLEC15Q6ZMC9 328 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 ZNF491Q8N8L2 437 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 URB1-AS1Q96HZ7 61 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 THYN1Q9P016 225 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 ABCA4P78363 2273 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 PTPRQQ9UMZ3 2332 aa5.52□□□□□ -1.53
TDP1-213ENST00000555880 LOC105371242A0A075B767 164 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 WI2-2373I1.2A0A1W2PRP0 233 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 NPIPB5A8MRT5 1133 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 CCL21O00585 134 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 NDUFA3O95167 84 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 IGLL1P15814 213 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 CD24P25063 80 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 HINT1P49773 126 aaPredicted RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 PRR31Q5SQ13 230 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 FAM120AOSQ5T036 256 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 PET117Q6UWS5 81 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 STPG4Q8N801 248 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 CFHR4Q92496 578 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 ARPC1AQ92747 370 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 ZNF414Q96IQ9 312 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 ZNF48Q96MX3 618 aaPredicted RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 TPPP3Q9BW30 176 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 TACC2O95359 2948 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 SPTBN4Q9H254 2564 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 FBLL1A6NHQ2 334 aaKnown RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 NCBP2LA6PVI3 153 aaKnown RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 APOHP02749 345 aaPredicted RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 NPSP0C0P6 89 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 ARMS2P0C7Q2 107 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 RPL7P18124 248 aaKnown RBP5.51□□□□□ -1.53
TDP1-213ENST00000555880 PRTN3P24158 256 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 FA2HQ7L5A8 372 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 KIR3DL3Q8N743 410 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 ORAOV1Q8WV07 137 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 C17orf77Q96MU5 243 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 AP5S1Q9NUS5 200 aa5.51□□□□□ -1.53
TDP1-213ENST00000555880 DMXL2Q8TDJ6 3036 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 IGLV11-55A0A075B6I3 123 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 TMEM189A5PLL7 270 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 ODF3BA8MYP8 253 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 OOSP1A8MZH6 123 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 CSN3P07498 182 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 KLRD1Q13241 179 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 KLF17Q5JT82 389 aaPredicted RBP5.5□□□□□ -1.53
TDP1-213ENST00000555880 SAPCD1Q5SSQ6 148 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 SLC25A34Q6PIV7 304 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 ZNF562Q6V9R5 426 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 GATD1Q8NB37 220 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 PRSS3P2Q8NHM4 247 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 NEU4Q8WWR8 484 aaPredicted RBP5.5□□□□□ -1.53
TDP1-213ENST00000555880 C21orf62Q9NYP8 219 aa5.5□□□□□ -1.53
TDP1-213ENST00000555880 SMG1Q96Q15 3661 aaKnown RBP5.5□□□□□ -1.53
TDP1-213ENST00000555880 H0Y8G0 127 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 M0R3E3 92 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 MRPS12O15235 138 aaKnown RBP5.49□□□□□ -1.53
TDP1-213ENST00000555880 GHRHP01286 108 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 LDLRAD2Q5SZI1 272 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 C1orf122Q6ZSJ8 110 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 SPATA12Q7Z6I5 190 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 TTC9CQ8N5M4 171 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 ARL6IP6Q8N6S5 226 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 ZNF738Q8NE65 137 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 OR10AG1Q8NH19 301 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 IGFBPL1Q8WX77 278 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 TIMM8BQ9Y5J9 83 aaPredicted RBP5.49□□□□□ -1.53
TDP1-213ENST00000555880 S4R3C0 116 aa5.49□□□□□ -1.53
TDP1-213ENST00000555880 LRBAP50851 2863 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms