RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZGRF1Q86YA3 2104 aa-0.56□□□□□ -2.5
SNX6-204ENST00000555541 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP-0.57□□□□□ -2.5
SNX6-204ENST00000555541 A0A1W2PRS3 328 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 hDV103S1A0JD37 113 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 IGHV3-33P01772 117 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 SPTBP11277 2137 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 HLA-EP13747 358 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 PDE6GP18545 87 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 UBE2BP63146 152 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 GUCA1BQ9UMX6 200 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 MGAMO43451 1857 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 NCOA1Q15788 1441 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 MIA2Q96PC5 1412 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 FAM208BQ5VWN6 2430 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 TENM4Q6N022 2769 aa-0.57□□□□□ -2.5
SNX6-204ENST00000555541 F8P00451 2351 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 A0A0J9YY99 117 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 CLDN24A6NM45 220 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 TMEM256-PLSCR3K7ERE1 68 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 TAX1BP3O14907 124 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 GGCTO75223 188 aaKnown RBP-0.58□□□□□ -2.5
SNX6-204ENST00000555541 IFNA16P05015 189 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 EVI2AP22794 236 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 DYNLT3P51808 116 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 COX6A2Q02221 97 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 AESQ08117 197 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 MIR22HGQ0VDD5 57 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 IAH1Q2TAA2 248 aaPredicted RBP-0.58□□□□□ -2.5
SNX6-204ENST00000555541 FOXI2Q6ZQN5 318 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 IDO2Q6ZQW0 420 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 CLDN22Q8N7P3 220 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 ZHX1-C8orf76Q96EF9 292 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 LINC00208Q96KT6 92 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 PARD6GQ9BYG4 376 aaPredicted RBP-0.58□□□□□ -2.5
SNX6-204ENST00000555541 NAT8BQ9UHF3 227 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 FREM3P0C091 2139 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 RTL1A6NKG5 1358 aa-0.58□□□□□ -2.5
SNX6-204ENST00000555541 KMT2AQ03164 3969 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 DUXBA0A1W2PPF3 345 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 PDE6DO43924 150 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 IFNA5P01569 189 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 SERPINA6P08185 405 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 ERP29P30040 261 aaKnown RBP-0.59□□□□□ -2.5
SNX6-204ENST00000555541 ETV6P41212 452 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 OMPP47874 163 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 IMPG1Q17R60 797 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 VMA21Q3ZAQ7 101 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 ARL5BQ96KC2 179 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 TRIM4Q9C037 500 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 ENY2Q9NPA8 101 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 NKIRAS1Q9NYS0 192 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 DOCK5Q9H7D0 1870 aa-0.59□□□□□ -2.5
SNX6-204ENST00000555541 SNAPC4Q5SXM2 1469 aa-0.6□□□□□ -2.5
SNX6-204ENST00000555541 NEBP20929 6669 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 FMN1Q68DA7 1419 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 A0A087WUJ7 227 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 CFDP00746 253 aaPredicted RBP-0.6□□□□□ -2.51
SNX6-204ENST00000555541 SNRPD3P62318 126 aaKnown RBP-0.6□□□□□ -2.51
SNX6-204ENST00000555541 H3F3AP84243 136 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 KLRD1Q13241 179 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 NEDD8Q15843 81 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 IFT20Q8IY31 132 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 GRPEL2Q8TAA5 225 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 TEX37Q96LM6 180 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 IMUPQ9GZP8 106 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 CACYBPQ9HB71 228 aaKnown RBP-0.6□□□□□ -2.51
SNX6-204ENST00000555541 MYH10P35580 1976 aa-0.6□□□□□ -2.51
SNX6-204ENST00000555541 RBBP6Q7Z6E9 1792 aaKnown RBP-0.6□□□□□ -2.51
SNX6-204ENST00000555541 CELSR2Q9HCU4 2923 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 SCN8AQ9UQD0 1980 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 M0R036 132 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 LYRM1O43325 122 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 TPM3P06753 285 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 ATP5G3P48201 142 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 MYL6P60660 151 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 DIAPH2-AS1Q14236 149 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 GOLT1AQ6ZVE7 132 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 SREK1IP1Q8N9Q2 155 aaPredicted RBP-0.61□□□□□ -2.51
SNX6-204ENST00000555541 AP1S3Q96PC3 154 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 CST11Q9H112 138 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 PRELID3BQ9Y3B1 194 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 ATP6V1DQ9Y5K8 247 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 AHCTF1Q8WYP5 2266 aa-0.61□□□□□ -2.51
SNX6-204ENST00000555541 PTPRFP10586 1907 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.62□□□□□ -2.51
SNX6-204ENST00000555541 PLXNA4Q9HCM2 1894 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 TRBV19A0A075B6N1 114 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 TRAV4A0A0B4J268 109 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 A6NN06 94 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 RER1O15258 196 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 IFNA7P01567 189 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 IGHV3-30P01768 117 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 IGHV3-30-5P0DP03 117 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 IDO1P14902 403 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 NFYBP25208 207 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 MAGOHP61326 146 aaKnown RBP-0.62□□□□□ -2.51
SNX6-204ENST00000555541 TPM4P67936 248 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 FXYD3Q14802 87 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 OTUD6BQ8N6M0 293 aa-0.62□□□□□ -2.51
SNX6-204ENST00000555541 PPTC7Q8NI37 304 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms