RNA–Protein interactions for RNA: ENST00000555518.5

LINC00643-203, long intergenic non-protein coding RNA 643, humanhuman

TSL 4

Gene LINC00643, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-203ENST00000555518 TECRQ9NZ01 308 aaKnown RBP4.8□□□□□ -1.64
LINC00643-203ENST00000555518 PUS1Q9Y606 427 aaKnown RBP eCLIP4.8□□□□□ -1.64
LINC00643-203ENST00000555518 IGHV3-35A0A0C4DH35 117 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 A0A0G2JLM5 398 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 TCF21O43680 179 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 HBE1P02100 147 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 CD5P06127 495 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 LGALS1P09382 135 aaKnown RBP4.79□□□□□ -1.64
LINC00643-203ENST00000555518 C8orf88P0DMB2 117 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 ORM2P19652 201 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 MT3P25713 68 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 GCHFRP30047 84 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 ARL3P36405 182 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 LYZP61626 148 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 SLC35B1P78383 322 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 ZNF506Q5JVG8 444 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 LEMD1Q68G75 181 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 HIST2H2BDQ6DRA6 164 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 UNQ9165/PRO28630Q6UXU0 137 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 LINC00305Q7Z4B0 112 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 OR1L4Q8NGR5 311 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 OR1B1Q8NGR6 318 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 UBE2E2Q96LR5 201 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 PFDN5Q99471 154 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 RNF2Q99496 336 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 RARRES2Q99969 163 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 SLC25A39Q9BZJ4 359 aaPredicted RBP4.79□□□□□ -1.64
LINC00643-203ENST00000555518 HIGD1AQ9Y241 93 aa4.79□□□□□ -1.64
LINC00643-203ENST00000555518 ATRQ13535 2644 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 IGHV3OR16-8A0A075B7F1 116 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 A0A1W2PPV4 95 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 NDUFA4O00483 81 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 NUPL2O15504 423 aaKnown RBP4.78□□□□□ -1.64
LINC00643-203ENST00000555518 CXorf1O96002 111 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 FABP1P07148 127 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 PYYP10082 97 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 BCL2P10415 239 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 CD28P10747 220 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 ADCYAP1P18509 176 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 CRYBB3P26998 211 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 KRTAP10-3P60369 221 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 RELQ04864 619 aaPredicted RBP4.78□□□□□ -1.64
LINC00643-203ENST00000555518 GUK1Q16774 197 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 KHDC3LQ587J8 217 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 C10orf25Q5T742 122 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 UQCC3Q6UW78 93 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 PQLC2Q6ZP29 291 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 OR5AU1Q8NGC0 362 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 Q8WTZ3 238 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 TMEM190Q8WZ59 177 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 FXYD5Q96DB9 178 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 OR5B12Q96R08 314 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 PBDC1Q9BVG4 233 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 TMEM231Q9H6L2 316 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 TMEM14CQ9P0S9 112 aa4.78□□□□□ -1.64
LINC00643-203ENST00000555518 PEF1Q9UBV8 284 aaKnown RBP4.78□□□□□ -1.64
LINC00643-203ENST00000555518 YTHDF2Q9Y5A9 579 aaKnown RBP4.78□□□□□ -1.64
LINC00643-203ENST00000555518 IGHV4OR15-8A0A075B7B6 117 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 A0A087WW49 117 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 RBFOX3A6NFN3 312 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF98A6NK75 572 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 FAM74A7A6NL05 159 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 H3BQ15 152 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 PRYO14603 147 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 PAGE4O60829 102 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 GGCTO75223 188 aaKnown RBP4.77□□□□□ -1.65
LINC00643-203ENST00000555518 SCGB2A1O75556 95 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 APOHP02749 345 aaPredicted RBP4.77□□□□□ -1.65
LINC00643-203ENST00000555518 CRYBA1P05813 215 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 SRP19P09132 144 aaKnown RBP4.77□□□□□ -1.65
LINC00643-203ENST00000555518 OR10J4P0C629 311 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 IGLC2P0DOY2 106 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 EDN2P20800 178 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 MYCNOSP40205 109 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 CDX1P47902 265 aaPredicted RBP4.77□□□□□ -1.65
LINC00643-203ENST00000555518 PSMB3P49720 205 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 CD81P60033 236 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 HAGHQ16775 308 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 C9orf47Q6ZRZ4 202 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 GPHB5Q86YW7 130 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 C4orf3Q8WVX3 66 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 LINC00052Q96N35 136 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 GNG13Q9P2W3 67 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 SMAD5-AS1Q9Y6J3 95 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 ARL2-SNX15V9GYD0 113 aa4.77□□□□□ -1.65
LINC00643-203ENST00000555518 NIPBLQ6KC79 2804 aaeCLIP4.77□□□□□ -1.65
LINC00643-203ENST00000555518 WNK1Q9H4A3 2382 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 TMEM218A2RU14 115 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 A8MWP6 167 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 GGTLC3B5MD39 225 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 ZNF207O43670 478 aaKnown RBP4.76□□□□□ -1.65
LINC00643-203ENST00000555518 BUB3O43684 328 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 OR7C2O60412 319 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 NDUFS6O75380 124 aaKnown RBP4.76□□□□□ -1.65
LINC00643-203ENST00000555518 NDUFB4O95168 129 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 HSPB1P04792 205 aaKnown RBP4.76□□□□□ -1.65
LINC00643-203ENST00000555518 NPPCP23582 126 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 ATP5G3P48201 142 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 TAS2R45P59539 299 aa4.76□□□□□ -1.65
LINC00643-203ENST00000555518 UBE2L3P68036 154 aaKnown RBP4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms