RNA–Protein interactions for RNA: ENST00000555022.5

SYNE2-217, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,396 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-217ENST00000555022 TMEM160Q9NX00 188 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 ANKRD11Q6UB99 2663 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 ZFHX2Q9C0A1 2572 aaPredicted RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 NOTCH3Q9UM47 2321 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 CEP295Q9C0D2 2601 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 IGHV3-66A0A0C4DH42 116 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 A0A1W2PPM0 123 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 PSMB11A5LHX3 300 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 HLA-DMBP28068 263 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 KIR2DS2P43631 304 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 TWIST1Q15672 202 aa7.09□□□□□ -1.27
SYNE2-217ENST00000555022 MRPL32Q9BYC8 188 aaKnown RBP7.09□□□□□ -1.27
SYNE2-217ENST00000555022 IGHV3-49A0A0A0MS15 119 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 SMAD7O15105 426 aaKnown RBP7.08□□□□□ -1.28
SYNE2-217ENST00000555022 LINC01545Q5VT33 79 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 Q6ZT83 130 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 F2RL2O00254 374 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 NPYP01303 97 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 CKS2P33552 79 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 FAM231DQ6ZW35 169 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 PRR7Q8TB68 274 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 ARRDC1-AS1Q9H2J1 176 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 FBXL15Q9H469 300 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 TNRC6BQ9UPQ9 1833 aaKnown RBP7.08□□□□□ -1.28
SYNE2-217ENST00000555022 CREBBPQ92793 2442 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 LYNX1G3V0Z9 82 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 LYNX1P0DP58 116 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 FOXC2Q99958 501 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 TMEM133Q9H2Q1 129 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 NDUFA4L2Q9NRX3 87 aa7.08□□□□□ -1.28
SYNE2-217ENST00000555022 A0A096LNJ9 63 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 NDUFS8O00217 210 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 FGF6P10767 208 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 UFSP1Q6NVU6 142 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 GAFA1Q96PS6 74 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 NPIPB5A8MRT5 1133 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 RBPJQ06330 500 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 ANXA2RQ3ZCQ2 193 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 TMEM164Q5U3C3 297 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 IFI27L1Q96BM0 104 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 HIGD1AQ9Y241 93 aa7.07□□□□□ -1.28
SYNE2-217ENST00000555022 TRAV26-2A0A0B4J265 109 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 CNIH1O95406 144 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 ORM1P02763 201 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 FAM27E3Q08E93 113 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 RIGQ13278 110 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 RNF7Q9UBF6 113 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 DCHS2Q6V1P9 2916 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 NDUFA3O95167 84 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 SMIM13P0DJ93 91 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 SEC11AP67812 179 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 HSD52Q0P140 79 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 ATP5L2Q7Z4Y8 100 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 OR5AN1Q8NGI8 311 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 ZNF418Q8TF45 676 aaPredicted RBP7.06□□□□□ -1.28
SYNE2-217ENST00000555022 ZNF714Q96N38 554 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 FAM90A9PA6NNJ1 464 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 H3BRM9 83 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 LAMTOR5O43504 91 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 SP9P0CG40 484 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 CT45A10P0DMU9 189 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 LEPP41159 167 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 RAB9AP51151 201 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 PROCRQ9UNN8 238 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 CUBNO60494 3623 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 TECTAO75443 2155 aa7.06□□□□□ -1.28
SYNE2-217ENST00000555022 C19orf71A6NCJ1 209 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 IGKV3-15P01624 115 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 IL4P05112 153 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 GP9P14770 177 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 CRIP1P50238 77 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 FDCSPQ8NFU4 85 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 MS4A6AQ9H2W1 248 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 PSG8Q9UQ74 426 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 UFC1Q9Y3C8 167 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 ZNF785A8K8V0 405 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 CRXO43186 299 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 MRPL51Q4U2R6 128 aaKnown RBP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 PTH2Q96A98 100 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 CHAC1Q9BUX1 264 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 MLST8Q9BVC4 326 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 NCOR1P1Q9H4R4 102 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 ATRXP46100 2492 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 TLN1Q9Y490 2541 aaKnown RBP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 TRAV26-1A0A087WT03 109 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 TMEM189A5PLL7 270 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 IGHV1-46P01743 117 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 RPL27AP46776 148 aaKnown RBP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 EMP1P54849 157 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 FAM162BQ5T6X4 162 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 RASL11AQ6T310 242 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 FMC1Q96HJ9 113 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 SIGMAR1Q99720 223 aa7.05□□□□□ -1.28
SYNE2-217ENST00000555022 SLC25A39Q9BZJ4 359 aaPredicted RBP7.05□□□□□ -1.28
SYNE2-217ENST00000555022 COL12A1Q99715 3063 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 NDUFS7O75251 213 aa7.04□□□□□ -1.28
SYNE2-217ENST00000555022 ZC2HC1BQ5TFG8 222 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms