RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 SHPKQ9UHJ6 478 aa5.69□□□□□ -1.5
ACTN1-212ENST00000554158 TMEM56-RWDD3S4R434 201 aa5.69□□□□□ -1.5
ACTN1-212ENST00000554158 HSPG2P98160 4391 aa5.69□□□□□ -1.5
ACTN1-212ENST00000554158 IGKV1D-37A0A075B6S9 117 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 SMCO3A2RU48 225 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 A8MTW9 85 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 J3KRW8 73 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 IAPPP10997 89 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 RPL7P18124 248 aaKnown RBP5.68□□□□□ -1.5
ACTN1-212ENST00000554158 AZU1P20160 251 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 ERVFC1-1P60608 527 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 RXFP4Q8TDU9 374 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 TMEM263Q8WUH6 116 aaKnown RBP5.68□□□□□ -1.5
ACTN1-212ENST00000554158 ZNF503Q96F45 646 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 FUNDC2Q9BWH2 189 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 MCUBQ9NWR8 336 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 ZNF586Q9NXT0 402 aa5.68□□□□□ -1.5
ACTN1-212ENST00000554158 H7BYZ3 331 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 CRXO43186 299 aaPredicted RBP5.67□□□□□ -1.5
ACTN1-212ENST00000554158 IL5P05113 134 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 OR5G3P0C626 314 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 ANXA7P20073 488 aaKnown RBP5.67□□□□□ -1.5
ACTN1-212ENST00000554158 CDKN1BP46527 198 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 KRTAP10-2P60368 255 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 IL18Q14116 193 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 IGFL4Q6B9Z1 124 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 LYZL2Q7Z4W2 148 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 CCDC190Q86UF4 302 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 THAP8Q8NA92 274 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 OR8A1Q8NGG7 326 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 OR51S1Q8NGJ8 323 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 C20orf144Q9BQM9 153 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 UPK3BQ9BT76 320 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 RABL2AQ9UBK7 228 aaPredicted RBP5.67□□□□□ -1.5
ACTN1-212ENST00000554158 RABL2BQ9UNT1 228 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 GPR132Q9UNW8 380 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 HIGD1AQ9Y241 93 aa5.67□□□□□ -1.5
ACTN1-212ENST00000554158 MRPS16Q9Y3D3 137 aaKnown RBP5.67□□□□□ -1.5
ACTN1-212ENST00000554158 TRGV2A0A075B6R0 118 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 A0A087WWL8 130 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 DUXBA0A1W2PPF3 345 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 GAGE12BA1L429 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 ZNF701M0R085 212 aaPredicted RBP5.66□□□□□ -1.5
ACTN1-212ENST00000554158 HYPMO75409 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 GAGE7O76087 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 GAGE12FP0CL80 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 GAGE12GP0CL81 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 GAGE12IP0CL82 117 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 SPANXN5Q5MJ07 72 aa5.66□□□□□ -1.5
ACTN1-212ENST00000554158 TRAV9-2A0A087WT02 112 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 PLAC8L1A1L4L8 177 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 H3BNG1 76 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 WRBO00258 174 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 SIVA1O15304 175 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 GATA2P23769 480 aaPredicted RBP5.65□□□□□ -1.5
ACTN1-212ENST00000554158 FAUP35544 74 aaKnown RBP5.65□□□□□ -1.5
ACTN1-212ENST00000554158 LINC00315P59091 139 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 PSG3Q16557 428 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 ESRGQ1W209 222 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 Q5VSD8 79 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 TMED4Q7Z7H5 227 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 NFE4Q86UQ8 179 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 RNASE8Q8TDE3 154 aaKnown RBP5.65□□□□□ -1.5
ACTN1-212ENST00000554158 SMIM4Q8WVI0 70 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 RPUSD4Q96CM3 377 aaKnown RBP5.65□□□□□ -1.5
ACTN1-212ENST00000554158 DIRAS2Q96HU8 199 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 FAM30AQ9NZY2 134 aa5.65□□□□□ -1.5
ACTN1-212ENST00000554158 STRAPQ9Y3F4 350 aaKnown RBP5.65□□□□□ -1.5
ACTN1-212ENST00000554158 IGKV1OR2-108A0A075B7D4 117 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 TRAV8-2A0A0B4J237 113 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 B5MCH6 92 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 H3BRN7 92 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 SYNGR2O43760 224 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 LINC00869P0C866 280 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 SELENOTP62341 195 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 LCN15Q6UWW0 184 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 CYP2G1PQ6ZSU1 146 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 SLC50A1Q9BRV3 221 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 SHANK2-AS3Q9BTD1 123 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 KRTAP1-5Q9BYS1 174 aa5.64□□□□□ -1.51
ACTN1-212ENST00000554158 H3BP45 60 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 SLC25A6P12236 298 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 CXCL2P19875 107 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 CXCL3P19876 107 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 LEPP41159 167 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 ACOT7LQ6ZUV0 252 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 LYPD1Q8N2G4 141 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 ZBTB8BQ8NAP8 495 aaPredicted RBP5.63□□□□□ -1.51
ACTN1-212ENST00000554158 NUDT10Q8NFP7 164 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 NUDT11Q96G61 164 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 ARL6Q9H0F7 186 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 MGAT4CQ9UBM8 478 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 RSL24D1Q9UHA3 163 aaKnown RBP5.63□□□□□ -1.51
ACTN1-212ENST00000554158 ICOSQ9Y6W8 199 aa5.63□□□□□ -1.51
ACTN1-212ENST00000554158 A0A087X0K7 114 aa5.62□□□□□ -1.51
ACTN1-212ENST00000554158 ANKRD20A5PA0PJZ0 165 aa5.62□□□□□ -1.51
ACTN1-212ENST00000554158 GOSR2O14653 212 aa5.62□□□□□ -1.51
ACTN1-212ENST00000554158 CTDSPLO15194 276 aa5.62□□□□□ -1.51
ACTN1-212ENST00000554158 PAX4O43316 350 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms