RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 FAAP20Q6NZ36 180 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 FOXI2Q6ZQN5 318 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 TPRA1Q86W33 373 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 FAM219AQ8IW50 185 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 SELENOHQ8IZQ5 122 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 C15orf53Q8NAA6 179 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 OR1S2Q8NGQ3 325 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 OR4A16Q8NH70 328 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 RNASE8Q8TDE3 154 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 GLYATL2Q8WU03 294 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 FCGR1BQ92637 280 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 IGF2BP2-AS1Q96M15 143 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 CNBD2Q96M20 576 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 RTBDNQ9BSG5 229 aaPredicted RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 NOP10Q9NPE3 64 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 SCN3BQ9NY72 215 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 KLK11Q9UBX7 282 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 TPRKBQ9Y3C4 175 aa2.09□□□□□ -2.07
SLIRP-202ENST00000553981 MRPS16Q9Y3D3 137 aaKnown RBP2.09□□□□□ -2.07
SLIRP-202ENST00000553981 C3orf85A0A1B0GTC6 90 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM189A5PLL7 270 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 CCNKO75909 580 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 HBE1P02100 147 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 CD3DP04234 171 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 CD5P06127 495 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 OR5AC1P0C628 307 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 PSMB9P28065 219 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 EIF2B2P49770 351 aaKnown RBP2.08□□□□□ -2.08
SLIRP-202ENST00000553981 PIGPP57054 158 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 RND3P61587 244 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 LSM3P62310 102 aaKnown RBP2.08□□□□□ -2.08
SLIRP-202ENST00000553981 OR2F1Q13607 317 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 GAMTQ14353 236 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 LINC01620Q4KN68 170 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 NMSQ5H8A3 153 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 SOHLH1Q5JUK2 328 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 C10orf67Q8IYJ2 551 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 C11orf72Q8NBR9 251 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 OR13C8Q8NGS7 320 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 OR5H2Q8NGV7 314 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 OR52I2Q8NH67 350 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 RXFP4Q8TDU9 374 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 Q8WTZ3 238 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 YIPF6Q96EC8 236 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 ACY3Q96HD9 319 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 ABHD1Q96SE0 405 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 TSC22D3Q99576 134 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 ATG101Q9BSB4 218 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 TMEM231Q9H6L2 316 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 C8orf4Q9NR00 106 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 FAM212BQ9NTI7 297 aaPredicted RBP2.08□□□□□ -2.08
SLIRP-202ENST00000553981 FKBP11Q9NYL4 201 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 CACNG5Q9UF02 275 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 TMED3Q9Y3Q3 217 aa2.08□□□□□ -2.08
SLIRP-202ENST00000553981 A0A0A6YYH2 397 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 LOC100506127A0A0U1RQW1 187 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 A6NJ64 397 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 ZNF98A6NK75 572 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 LYRM9A8MSI8 78 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 H3BTX0 84 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 H7C423 109 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SLC17A3O00476 420 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 CYB5BO43169 146 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 HPGDSO60760 199 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 CDS2O95674 445 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 ATP5G1P05496 136 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 RD3LP0DJH9 198 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 HTN1P15515 57 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 TSPOP30536 169 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SNCAP37840 140 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 HTR2BP41595 481 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 CBX5P45973 191 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 ATP5G3P48201 142 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 ALDH3B2P48448 385 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 PSMB3P49720 205 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 CCL18P55774 89 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SPCS3P61009 180 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 LYZP61626 148 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 NCS1P62166 190 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SNRPD3P62318 126 aaKnown RBP2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SUPT4H1P63272 117 aaKnown RBP2.07□□□□□ -2.08
SLIRP-202ENST00000553981 OR5I1Q13606 314 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 ARL6IP1Q15041 203 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 KCTD21Q4G0X4 260 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 PRR9Q5T870 116 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 IZUMO2Q6UXV1 221 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 PATE2Q6UY27 113 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 Q6ZSA8 131 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 Q6ZTI0 123 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 LYZL2Q7Z4W2 148 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 WFDC10BQ8IUB3 73 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SNX29P2Q8IUI4 249 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SLC35G3Q8N808 338 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 SAMD12Q8N8I0 201 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 THAP8Q8NA92 274 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 OR52E5Q8NH55 327 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 MARCH1Q8TCQ1 289 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 FRZBQ92765 325 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 DNAJC30Q96LL9 226 aa2.07□□□□□ -2.08
SLIRP-202ENST00000553981 VGLL1Q99990 258 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms