RNA–Protein interactions for RNA: ENST00000553888.5

VIPAS39-206, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VIPAS39, Length 2,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-206ENST00000553888 IGLV2-8P01709 118 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 DDTP30046 118 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 ID1P41134 155 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 TEX38Q6PEX7 206 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 IGF2BP2-AS1Q96M15 143 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 KLK15Q9H2R5 256 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 NAGKQ9UJ70 344 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 HECTD1Q9ULT8 2610 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHV3-66A0A0C4DH42 116 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 C1orf196B1AJZ1 125 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 ZNF207O43670 478 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 BOD1L2Q8IYS8 172 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 LRRC75A-AS1Q8N1F1 130 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 FAM210BQ96KR6 192 aa9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
VIPAS39-206ENST00000553888 UNC79Q9P2D8 2635 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHV3-49A0A0A0MS15 119 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 TRBV12-3P01733 135 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 TRGV3P03979 118 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 MGST1P10620 155 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 HIST1H1BP16401 226 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 VN1R17PQ8TDU5 208 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 DUX5Q96PT3 197 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 C9JCJ5 164 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 MRPS12O15235 138 aaKnown RBP9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 TCEAL7Q9BRU2 100 aa9.88□□□□□ -0.83
VIPAS39-206ENST00000553888 TRAV8-1A0A0A6YYK1 113 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 TGOLN2O43493 480 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 TCF21O43680 179 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHV3-11P01762 117 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 IGHG2P01859 326 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 TRGC2P03986 189 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 C10orf99Q6UWK7 81 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 TOMM20LQ6UXN7 152 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 EPDR1Q9UM22 224 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 FASNP49327 2511 aaKnown RBP9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 IGLC2P0DOY2 106 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 TPPP2P59282 170 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 OR5B12Q96R08 314 aa9.87□□□□□ -0.83
VIPAS39-206ENST00000553888 J3QLI3 93 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 HIST1H1EP10412 219 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 IER3P46695 156 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 RAB5BP61020 215 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 IGFL4Q6B9Z1 124 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 BPIFA4PQ86YQ2 179 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 TMEM14CQ9P0S9 112 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 APOHP02749 345 aaPredicted RBP9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 IGF1P05019 195 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 PPIFP30405 207 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 ERVFC1-1P60608 527 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 OR10G8Q8NGN5 311 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 ZFAND3Q9H8U3 227 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 TRBV19A0A075B6N1 114 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 FSHBP01225 129 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 CNN1P51911 297 aaKnown RBP9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 KLK9Q2XQG4 91 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 EEF1AKMT3Q96AZ1 226 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 VPS25Q9BRG1 176 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 PITPNC1Q9UKF7 332 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 KLK9Q9UKQ9 250 aa9.86□□□□□ -0.83
VIPAS39-206ENST00000553888 M0R3E3 92 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 CA1P00915 261 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 CRIP2P52943 208 aaPredicted RBP9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 GAGE1Q13065 139 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 PRR27Q6MZM9 219 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 TRBV24-1A0A075B6N3 115 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 HERV-K104P63124 156 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 CDPF1Q6NVV7 123 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 OR4F17Q8NGA8 305 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 DPF1Q92782 380 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 MBD6Q96DN6 1003 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 VCX2Q9H322 139 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 CDC42EP3Q9UKI2 254 aa9.85□□□□□ -0.83
VIPAS39-206ENST00000553888 CLPSL1A2RUU4 121 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 FBLL1A6NHQ2 334 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 TCRAP04437 139 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 FRMD6-AS1P0C7T7 363 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 SIGLEC15Q6ZMC9 328 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 BAGE2Q86Y30 109 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 RABAC1Q9UI14 185 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 SELENOKQ9Y6D0 94 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 SMAD5-AS1Q9Y6J3 95 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 ANK3Q12955 4377 aaKnown RBP9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 NF1P21359 2839 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 HLA-DMBP28068 263 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 GOLT1AQ6ZVE7 132 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 C5orf17Q8NAS9 161 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 V9GYV3 84 aa9.84□□□□□ -0.83
VIPAS39-206ENST00000553888 EREGO14944 169 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 HOXA3O43365 443 aaPredicted RBP9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 CD99P14209 185 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 OR8I2Q8N0Y5 310 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 FRZBQ92765 325 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 SPINK4O60575 86 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 TNFRSF6BO95407 300 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 GCGP01275 180 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 TCL1AP56279 114 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 UBE2G1P62253 170 aa9.83□□□□□ -0.84
VIPAS39-206ENST00000553888 PYGO2Q9BRQ0 406 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms