RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 IMMP2LQ96T52 175 aa12.28□□□□□ -0.44
ACTN1-209ENST00000553659 MRPL27Q9P0M9 148 aaKnown RBP12.28□□□□□ -0.44
ACTN1-209ENST00000553659 IGHV3-21A0A0B4J1V1 117 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 IGKV1-17P01599 117 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 IGHG4P01861 327 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 S100A9P06702 114 aaKnown RBP12.27□□□□□ -0.45
ACTN1-209ENST00000553659 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-209ENST00000553659 TAS2R60P59551 318 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 LYZP61626 148 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 CFHR3Q02985 330 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 KIAA0141Q14154 515 aaPredicted RBP12.27□□□□□ -0.45
ACTN1-209ENST00000553659 ELOBQ15370 118 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 Q56UQ5 140 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 KCNIP4Q6PIL6 250 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 UNQ5815/PRO19632Q6UWF5 114 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 C4orf3Q8WVX3 66 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 ASCL2Q99929 193 aa12.27□□□□□ -0.45
ACTN1-209ENST00000553659 TRBV24-1A0A075B6N3 115 aa12.26□□□□□ -0.45
ACTN1-209ENST00000553659 HELTA6NFD8 242 aa12.26□□□□□ -0.45
ACTN1-209ENST00000553659 OR10J4P0C629 311 aa12.26□□□□□ -0.45
ACTN1-209ENST00000553659 FXYD5Q96DB9 178 aa12.26□□□□□ -0.45
ACTN1-209ENST00000553659 FBXL7Q9UJT9 491 aa12.26□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF256Q9Y2P7 627 aaPredicted RBP12.26□□□□□ -0.45
ACTN1-209ENST00000553659 TRAV5A0A0B4J249 113 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 GGTLC3B5MD39 225 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 H3BUA1 57 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 ATP6V0E1O15342 81 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 BRI3O95415 125 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 PSMB8P28062 276 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 CNN1P51911 297 aaKnown RBP12.25□□□□□ -0.45
ACTN1-209ENST00000553659 SUMO1P63165 101 aaKnown RBP12.25□□□□□ -0.45
ACTN1-209ENST00000553659 FHL3Q13643 280 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 NECAP1Q8NC96 275 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 RNF125Q96EQ8 232 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 HSPB9Q9BQS6 159 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 SHANK2-AS3Q9BTD1 123 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 SLC25A39Q9BZJ4 359 aaPredicted RBP12.25□□□□□ -0.45
ACTN1-209ENST00000553659 BIN3Q9NQY0 253 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF580Q9UK33 172 aa12.25□□□□□ -0.45
ACTN1-209ENST00000553659 TRBV9A0A0B4J1U6 114 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 H3BRN7 92 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 IGF1P05019 195 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 NBEAP1P0C6P0 100 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 HIST1H1EP10412 219 aaKnown RBP12.24□□□□□ -0.45
ACTN1-209ENST00000553659 GP9P14770 177 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 CRYBB3P26998 211 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 RPL35P42766 123 aaKnown RBP12.24□□□□□ -0.45
ACTN1-209ENST00000553659 GALR1P47211 349 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 GNG4P50150 75 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 INSL3P51460 131 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 ECSCRQ19T08 205 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 MORN5Q5VZ52 161 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 BPIFA4PQ86YQ2 179 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 OR5T1Q8NG75 326 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 OR11H1Q8NG94 326 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 C2CD4CQ8TF44 421 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 SMIM12Q96EX1 92 aa12.24□□□□□ -0.45
ACTN1-209ENST00000553659 FAM223BA6NKX1 122 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 OR2J3O76001 311 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 NDUFB8O95169 186 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 IL4P05112 153 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 PYYP10082 97 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 RAB9AP51151 201 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF343Q6P1L6 599 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 FAM223AQ8IWN6 122 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 LYPD1Q8N2G4 141 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF491Q8N8L2 437 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 MYOZ3Q8TDC0 251 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 EEF1AKMT3Q96AZ1 226 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 SFRP2Q96HF1 295 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 FAM210BQ96KR6 192 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 DERL1Q9BUN8 251 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 SMAD5-AS1Q9Y6J3 95 aa12.23□□□□□ -0.45
ACTN1-209ENST00000553659 TRAV9-1A0A075B6T8 112 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 TRBV7-1A0A0A6YYK4 115 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 PEX7O00628 323 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 RPS10P46783 165 aaKnown RBP12.22□□□□□ -0.45
ACTN1-209ENST00000553659 C5orf17Q8NAS9 161 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF502Q8TBZ5 544 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 UBE2E2Q96LR5 201 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 PYGO2Q9BRQ0 406 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 ELOVL1Q9BW60 279 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 OTORQ9NRC9 128 aa12.22□□□□□ -0.45
ACTN1-209ENST00000553659 TRAV41A0A0B4J266 112 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 PFN1P07737 140 aaKnown RBP12.21□□□□□ -0.45
ACTN1-209ENST00000553659 PPIFP30405 207 aaKnown RBP12.21□□□□□ -0.45
ACTN1-209ENST00000553659 RPL19P84098 196 aaKnown RBP12.21□□□□□ -0.45
ACTN1-209ENST00000553659 CASC10Q5T4H9 136 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 ZNF600Q6ZNG1 722 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 OR10G8Q8NGN5 311 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 OR1N2Q8NGR9 330 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 MUC7Q8TAX7 377 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 URGCP-MRPS24S4R325 110 aa12.21□□□□□ -0.45
ACTN1-209ENST00000553659 TRBV20OR9-2A0A075B6H5 130 aa12.2□□□□□ -0.46
ACTN1-209ENST00000553659 F8W735 103 aaPredicted RBP12.2□□□□□ -0.46
ACTN1-209ENST00000553659 BMPR1BO00238 502 aa12.2□□□□□ -0.46
ACTN1-209ENST00000553659 S100A6P06703 90 aa12.2□□□□□ -0.46
ACTN1-209ENST00000553659 RHOGP84095 191 aa12.2□□□□□ -0.46
ACTN1-209ENST00000553659 PDE6HQ13956 83 aa12.2□□□□□ -0.46
ACTN1-209ENST00000553659 CENPWQ5EE01 88 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms