RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 VSIG2Q96IQ7 327 aa9.73□□□□□ -0.85
NEDD1-205ENST00000553609 A0A096LPF7 62 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GAGE12BA1L429 117 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 RGS5O15539 181 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GAGE7O76087 117 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GAGE12FP0CL80 117 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GAGE12GP0CL81 117 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GAGE12IP0CL82 117 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 SLC25A6P12236 298 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 PLP1P60201 277 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 GFI1BQ5VTD9 330 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 LRTM2Q8N967 370 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 RPUSD4Q96CM3 377 aaKnown RBP9.72□□□□□ -0.85
NEDD1-205ENST00000553609 SCGB3A2Q96PL1 93 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 CIB3Q96Q77 187 aaPredicted RBP9.72□□□□□ -0.85
NEDD1-205ENST00000553609 C20orf144Q9BQM9 153 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 PARD6GQ9BYG4 376 aaPredicted RBP9.72□□□□□ -0.85
NEDD1-205ENST00000553609 PGPEP1Q9NXJ5 209 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 SCP2D1Q9UJQ7 156 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 HIGD1AQ9Y241 93 aa9.72□□□□□ -0.85
NEDD1-205ENST00000553609 H3BP45 60 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 WRBO00258 174 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 SYNGR2O43760 224 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 ANXA3P12429 323 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 S100A7P31151 101 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 KRTAP10-1P60331 282 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 AKR1C1Q04828 323 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 PATE2Q6UY27 113 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 CYP2G1PQ6ZSU1 146 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 TMPRSS5Q9H3S3 457 aa9.71□□□□□ -0.86
NEDD1-205ENST00000553609 HYPMO75409 117 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 ADAP1O75689 374 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 LINC00869P0C866 280 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 SMIM18P0DKX4 95 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 RAP2BP61225 183 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 IL18Q14116 193 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 SPANXN5Q5MJ07 72 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 CDPF1Q6NVV7 123 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 ZNF331Q9NQX6 463 aaPredicted RBP9.7□□□□□ -0.86
NEDD1-205ENST00000553609 MCUBQ9NWR8 336 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 PPP1R14DQ9NXH3 145 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 DNAH8Q96JB1 4490 aa9.7□□□□□ -0.86
NEDD1-205ENST00000553609 PMS2P5A8MQ11 134 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 PRAC2D3DTV9 90 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 MED6O75586 246 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 RLN2P04090 185 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 IL5P05113 134 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 RPP30P78346 268 aaKnown RBP9.69□□□□□ -0.86
NEDD1-205ENST00000553609 SPCS2Q15005 226 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 TMEM128Q5BJH2 165 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 Q6ZTI0 123 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 ZBTB8BQ8NAP8 495 aaPredicted RBP9.69□□□□□ -0.86
NEDD1-205ENST00000553609 TNFRSF18Q9Y5U5 241 aa9.69□□□□□ -0.86
NEDD1-205ENST00000553609 PIGBOS1A0A0B4J2F0 54 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 DNAH10OSP0CZ25 163 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
NEDD1-205ENST00000553609 TMED4Q7Z7H5 227 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 FRZBQ92765 325 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 DIRAS2Q96HU8 199 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 SOSTQ9BQB4 213 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 RABL2BQ9UNT1 228 aa9.68□□□□□ -0.86
NEDD1-205ENST00000553609 LINC00854A0A1B0GVQ3 168 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 SNURFLB1AK76 121 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 K7EPK0 472 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 SLC17A3O00476 420 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 SIVA1O15304 175 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 OR5G3P0C626 314 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 CXCL2P19875 107 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 ERVFC1-1P60608 527 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 CCDC28AQ8IWP9 274 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 C18orf15Q96N68 181 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 PTTG2Q9NZH5 202 aa9.67□□□□□ -0.86
NEDD1-205ENST00000553609 RABL2AQ9UBK7 228 aaPredicted RBP9.67□□□□□ -0.86
NEDD1-205ENST00000553609 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
NEDD1-205ENST00000553609 A0A087WTM6 91 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 SMCO3A2RU48 225 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 CCNKO75909 580 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 NXPH4O95158 308 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 SNRPCP09234 159 aaKnown RBP9.66□□□□□ -0.86
NEDD1-205ENST00000553609 VAMP1P23763 118 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 SELENOTP62341 195 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 LCN15Q6UWW0 184 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 C11orf72Q8NBR9 251 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 LRRC20Q8TCA0 184 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 SLC50A1Q9BRV3 221 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 ARL6Q9H0F7 186 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 MDFICQ9P1T7 246 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 HMCN2Q8NDA2 5059 aa9.66□□□□□ -0.86
NEDD1-205ENST00000553609 SMR3BP02814 79 aaPredicted RBP9.65□□□□□ -0.86
NEDD1-205ENST00000553609 CT45A10P0DMU9 189 aa9.65□□□□□ -0.86
NEDD1-205ENST00000553609 ID3Q02535 119 aa9.65□□□□□ -0.86
NEDD1-205ENST00000553609 PPP1R1AQ13522 171 aa9.65□□□□□ -0.86
NEDD1-205ENST00000553609 TRIM63Q969Q1 353 aa9.65□□□□□ -0.86
NEDD1-205ENST00000553609 ARV1Q9H2C2 271 aa9.65□□□□□ -0.86
NEDD1-205ENST00000553609 TRAV12-3A0A0B4J271 114 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 H3BTX0 84 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 EREGO14944 169 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 SFT2D2O95562 160 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 HOXB5P09067 269 aa9.64□□□□□ -0.87
NEDD1-205ENST00000553609 IGLC2P0DOY2 106 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms