RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 MSRB2Q9Y3D2 182 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 MYMXA0A1B0GTQ4 84 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 C14orf178Q8N769 122 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-208ENST00000553289 hDV102S1A0JD36 115 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 LINC00205P59089 165 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 TMEM249Q2WGJ8 235 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 LIME1Q9H400 295 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 AMN1Q8IY45 258 aa9.32□□□□□ -0.92
SYNE2-208ENST00000553289 DLX4Q92988 240 aaPredicted RBP9.32□□□□□ -0.92
SYNE2-208ENST00000553289 IGHV3-64A0A075B6Q5 118 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 PRSS46E5RG02 174 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 PFN1P07737 140 aaKnown RBP9.31□□□□□ -0.92
SYNE2-208ENST00000553289 CFHR2P36980 270 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 ERCC8Q13216 396 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
SYNE2-208ENST00000553289 LY6G5BQ8NDX9 201 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 BPESC1Q9GZL8 116 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 C11orf68Q9H3H3 251 aaKnown RBP9.31□□□□□ -0.92
SYNE2-208ENST00000553289 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 FAM231DQ6ZW35 169 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 HS3ST6Q96QI5 342 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 RHODO00212 210 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 CD5LO43866 347 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 NDUFS6O75380 124 aaKnown RBP9.31□□□□□ -0.92
SYNE2-208ENST00000553289 ZNF124Q15973 351 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 DMRTC2Q8IXT2 367 aaPredicted RBP9.31□□□□□ -0.92
SYNE2-208ENST00000553289 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 PROK2Q9HC23 129 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 LRRK1Q38SD2 2015 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 PAX9P55771 341 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 TEX36Q5VZQ5 186 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 UNQ6494/PRO21346Q6UXR6 183 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 JPT2Q9H910 190 aa9.31□□□□□ -0.92
SYNE2-208ENST00000553289 CEP250Q9BV73 2442 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TNFRSF6BO95407 300 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 LGALS1P09382 135 aaKnown RBP9.3□□□□□ -0.92
SYNE2-208ENST00000553289 MLANAQ16655 118 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TCF20Q9UGU0 1960 aaKnown RBP9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TP53BP1Q12888 1972 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TDGF1P3P51864 188 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TMEM14CQ9P0S9 112 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 K7ENP7 123 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 CEACAM8P31997 349 aaPredicted RBP9.3□□□□□ -0.92
SYNE2-208ENST00000553289 MPV17L2Q567V2 206 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 C20orf144Q9BQM9 153 aa9.3□□□□□ -0.92
SYNE2-208ENST00000553289 TRBV19A0A075B6N1 114 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 A6NNC1 897 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 ARMS2P0C7Q2 107 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 C11orf44Q8N8P7 122 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 KLHL30-AS1Q8NEE0 82 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 TIMM21Q9BVV7 248 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 PLXNA4Q9HCM2 1894 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 NEGR1Q7Z3B1 354 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 ZNF664Q8N3J9 261 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 RNF114Q9Y508 228 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 MPDZO75970 2070 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 INTS1Q8N201 2190 aaKnown RBP9.29□□□□□ -0.92
SYNE2-208ENST00000553289 LY6G6EA0A0G2JKS1 128 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 OVOL3O00110 214 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 PAX4O43316 350 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 IGLV1-44P01699 117 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 MSMBP08118 114 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 CST9LQ9H4G1 147 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 U3KQA8 63 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 A0A087X0K7 114 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 TMEM141Q96I45 108 aa9.29□□□□□ -0.92
SYNE2-208ENST00000553289 A0A0U1RRA0 63 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 LEPROTO15243 131 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 UBE2V1Q13404 147 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 C17orf58Q2M2W7 97 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 FAM104BQ5XKR9 115 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 Q6ZR03 302 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 LCNL1Q6ZST4 164 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 IGLV3-1P01715 115 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 GAGE2BQ13066 116 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 KIR3DS1Q14943 382 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 C18orf32Q8TCD1 76 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 CHAC1Q9BUX1 264 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 GVINP1Q7Z2Y8 2422 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 IGHV3-73A0A0B4J1V6 119 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 C10orf91Q5T1B1 145 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 C9JQL5 133 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 ATP6V0E1O15342 81 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 IL17RELQ6ZVW7 336 aa9.28□□□□□ -0.92
SYNE2-208ENST00000553289 ESDP10768 282 aa9.27□□□□□ -0.92
SYNE2-208ENST00000553289 IGFL4Q6B9Z1 124 aa9.27□□□□□ -0.92
SYNE2-208ENST00000553289 Q8N8P6 123 aa9.27□□□□□ -0.92
SYNE2-208ENST00000553289 LINC00479Q96M42 142 aa9.27□□□□□ -0.92
SYNE2-208ENST00000553289 IGHV1-69DA0A0B4J2H0 117 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 IGHV1-69P01742 117 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 IGLV3-9A0A075B6K5 115 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 LOXP28300 417 aaPredicted RBP9.27□□□□□ -0.93
SYNE2-208ENST00000553289 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 GATD1Q8NB37 220 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 IGHV2-70DA0A0C4DH43 119 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 IGKV1-39P01597 117 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 IGKV1D-39P04432 117 aa9.27□□□□□ -0.93
SYNE2-208ENST00000553289 ZFAND6Q6FIF0 208 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms