RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 GPX1P07203 203 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 BRS3P32247 399 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 COA5Q86WW8 74 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 OR51A4Q8NGJ6 313 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 OR5D14Q8NGL3 314 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 HSPB8Q9UJY1 196 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 HIGD1AQ9Y241 93 aa2.69□□□□□ -1.98
SCFD1-208ENST00000553278 ARHGEF11O15085 1522 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 NISCHQ9Y2I1 1504 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 OR2H2O95918 312 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 MRPS36P82909 103 aaKnown RBP2.68□□□□□ -1.98
SCFD1-208ENST00000553278 PDE6HQ13956 83 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 DEFB115Q30KQ5 88 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 DEFB113Q30KQ7 82 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 SMIM21Q3B7S5 101 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 MORN2Q502X0 79 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 FP248Q71RG6 208 aaPredicted RBP2.68□□□□□ -1.98
SCFD1-208ENST00000553278 BRK1Q8WUW1 75 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 FN1P02751 2386 aaKnown RBP2.68□□□□□ -1.98
SCFD1-208ENST00000553278 MICAL3Q7RTP6 2002 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 ANAPC1Q9H1A4 1944 aa2.68□□□□□ -1.98
SCFD1-208ENST00000553278 STRCP1A6NGW2 1772 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 MED23Q9ULK4 1368 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 RPL22P35268 128 aaKnown RBP2.67□□□□□ -1.98
SCFD1-208ENST00000553278 CDK6Q00534 326 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 CDK5R1Q15078 307 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 DIRC1Q969H9 104 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 HYLS1Q96M11 299 aa2.67□□□□□ -1.98
SCFD1-208ENST00000553278 VIRMAQ69YN4 1812 aaKnown RBP2.67□□□□□ -1.98
SCFD1-208ENST00000553278 HEATR5BQ9P2D3 2071 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 TCRBV4S1A1TA0A5B7 111 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 C5orf58C9J3I9 102 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 PAEPP09466 180 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 DSCR4P56555 118 aaPredicted RBP2.66□□□□□ -1.98
SCFD1-208ENST00000553278 Q8N814 137 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 OR5A2Q8NGI9 324 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 MUCL1Q96DR8 90 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 AP1S3Q96PC3 154 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 TAF9BQ9HBM6 251 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 COPZ2Q9P299 210 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 DIDO1Q9BTC0 2240 aaKnown RBP2.66□□□□□ -1.98
SCFD1-208ENST00000553278 FER1L6Q2WGJ9 1857 aa2.66□□□□□ -1.98
SCFD1-208ENST00000553278 CPDO75976 1380 aa2.65□□□□□ -1.98
SCFD1-208ENST00000553278 BAHCC1Q9P281 2608 aa2.65□□□□□ -1.98
SCFD1-208ENST00000553278 IGKV2D-26A0A0A0MRZ7 120 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 hDV103S1A0JD37 113 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 IGLV1-51P01701 117 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 FABP4P15090 132 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 CRYGSP22914 178 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 KRTAP10-1P60331 282 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 PSPHP78330 225 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 CCDC58Q4VC31 144 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 C1orf134Q5TEV5 83 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 C2orf82Q6UX34 121 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 MORN4Q8NDC4 146 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 Q96M85 177 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 KIAA1107Q9UPP5 1409 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 FRMPD1Q5SYB0 1578 aa2.65□□□□□ -1.99
SCFD1-208ENST00000553278 TCOF1Q13428 1488 aaKnown RBP2.65□□□□□ -1.99
SCFD1-208ENST00000553278 A0A1B0GW64 132 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 B4DSR2 109 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 E7EUB6 86 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 TPT1P13693 172 aaKnown RBP2.64□□□□□ -1.99
SCFD1-208ENST00000553278 MAXP61244 160 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 Q5XG85 94 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 CLECL1Q8IZS7 167 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 LRRC18Q8N456 261 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 NAT14Q8WUY8 206 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 C4orf3Q8WVX3 66 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 RAB37Q96AX2 223 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 CALML5Q9NZT1 146 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 TPRKBQ9Y3C4 175 aa2.64□□□□□ -1.99
SCFD1-208ENST00000553278 TRAV27A0A087WT01 109 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 TRBV6-5A0A0K0K1A5 114 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 COX4I1P13073 169 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 FOXA3P55318 350 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-208ENST00000553278 LSM3P62310 102 aaKnown RBP2.63□□□□□ -1.99
SCFD1-208ENST00000553278 MAGOHBQ96A72 148 aaKnown RBP2.63□□□□□ -1.99
SCFD1-208ENST00000553278 OR4C12Q96R67 309 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 TP53RKQ96S44 253 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 SOX21Q9Y651 276 aaPredicted RBP2.63□□□□□ -1.99
SCFD1-208ENST00000553278 MED12LQ86YW9 2145 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 DLC1Q96QB1 1528 aa2.63□□□□□ -1.99
SCFD1-208ENST00000553278 NOTCH2Q04721 2471 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 FREM1Q5H8C1 2179 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-208ENST00000553278 MT-ND4LP03901 98 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 CIRBPQ14011 172 aaKnown RBP2.62□□□□□ -1.99
SCFD1-208ENST00000553278 C1orf137Q5JT78 98 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 TMEM244Q5VVB8 128 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 Q6ZRN7 208 aaPredicted RBP2.62□□□□□ -1.99
SCFD1-208ENST00000553278 OR4S1Q8NGB4 309 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 PFDN5Q99471 154 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 TSC22D3Q99576 134 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 NIT2Q9NQR4 276 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 PAIP2BQ9ULR5 123 aaKnown RBP2.62□□□□□ -1.99
SCFD1-208ENST00000553278 DSPPQ9NZW4 1301 aa2.62□□□□□ -1.99
SCFD1-208ENST00000553278 COL11A1P12107 1806 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-208ENST00000553278 KDM6AO15550 1401 aaPredicted RBP2.61□□□□□ -1.99
SCFD1-208ENST00000553278 TNS3Q68CZ2 1445 aa2.61□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms