RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	WDR61	Q9GZS3	305 aa	Known RBP	4.98	□□□□□ -1.61
PFKM-231	ENST00000553055	TMEM126A	Q9H061	195 aa		4.98	□□□□□ -1.61
PFKM-231	ENST00000553055	PKDREJ	Q9NTG1	2253 aa		4.98	□□□□□ -1.61
PFKM-231	ENST00000553055	GTF3C1	Q12789	2109 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	PKD1L1	Q8TDX9	2849 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	DCHS2	Q6V1P9	2916 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	POLE	Q07864	2286 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	IGLV3-16	A0A075B6K0	115 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	IGHV3-21	A0A0B4J1V1	117 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	TRAV4	A0A0B4J268	109 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055		A0A0J9YY10	115 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055		A0A1B0GX78	115 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	MPC2	O95563	127 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	DBI	P07108	87 aa	Known RBP	4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	PTHLH	P12272	177 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	ELK1	P19419	428 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	ATP5G3	P48201	142 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	FGF12	P61328	243 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	TBPL1	P62380	186 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	HBA1	P69905	142 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	UNQ9165/PRO28630	Q6UXU0	137 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	NUP35	Q8NFH5	326 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	OR9A2	Q8NGT5	310 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	OR2T35	Q8NGX2	323 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	SGMS2	Q8NHU3	365 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	ZNF721	Q8TF20	911 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	LINC00052	Q96N35	136 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	SMR3A	Q99954	134 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	REG4	Q9BYZ8	158 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	IMUP	Q9GZP8	106 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	ABRACL	Q9P1F3	81 aa		4.97	□□□□□ -1.61
PFKM-231	ENST00000553055	PLXNA2	O75051	1894 aa		4.96	□□□□□ -1.61
PFKM-231	ENST00000553055	CXorf51A	A0A1B0GTR3	108 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	TMEM269	A0A1B0GVZ9	245 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	HMSD	A8MTL9	139 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	SNRPGP15	A8MWD9	76 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	C11orf94	C9JXX5	98 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	IGLV1-47	P01700	117 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	UBB	P0CG47	229 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	OPRK1	P41145	380 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	CAV3	P56539	151 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	UBA52	P62987	128 aa	Known RBP	4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	MRPS10	P82664	201 aa	Known RBP	4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	DHRS2	Q13268	280 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF322	Q6U7Q0	402 aa	Predicted RBP	4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	ANGPTL5	Q86XS5	388 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	PDZD9	Q8IXQ8	264 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	AMN1	Q8IY45	258 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	THEM6	Q8WUY1	208 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	OR5P3	Q8WZ94	311 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	C2orf50	Q96LR7	162 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	FOPNL	Q96NB1	174 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	PRRC2A	P48634	2157 aa	Known RBP	4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	TLN2	Q9Y4G6	2542 aa		4.96	□□□□□ -1.62
PFKM-231	ENST00000553055	MYOF	Q9NZM1	2061 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	DPRX	A6NFQ7	191 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF98	A6NK75	572 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	PDCD5	O14737	125 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	APOC1	P02654	83 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	C1QC	P02747	245 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	IFNA4	P05014	189 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	IL5	P05113	134 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	CSN2	P05814	226 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	NMB	P08949	121 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF823	P16415	610 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	BSPH1	Q075Z2	132 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	LYRM7	Q5U5X0	104 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	AGTRAP	Q6RW13	159 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	COMMD6	Q7Z4G1	85 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	LINC01560	Q8TB33	94 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	SMIM4	Q8WVI0	70 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	ITLN2	Q8WWU7	325 aa	Predicted RBP	4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	TOMM6	Q96B49	74 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	IGF2BP2-AS1	Q96M15	143 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	SPIN2A	Q99865	258 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	SPIN2B	Q9BPZ2	258 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	C11orf68	Q9H3H3	251 aa	Known RBP	4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	RERGL	Q9H628	205 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	CYSLTR1	Q9Y271	337 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	ANAPC1	Q9H1A4	1944 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	MXRA5	Q9NR99	2828 aa		4.95	□□□□□ -1.62
PFKM-231	ENST00000553055	MEGF8	Q7Z7M0	2845 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	TRAV1-2	A0A0B4J238	106 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055		G3V3Q6	166 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	CREBL2	O60519	120 aa	Predicted RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	CFD	P00746	253 aa	Predicted RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	SRP19	P09132	144 aa	Known RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	OR5AC1	P0C628	307 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	CD28	P10747	220 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	NFYA	P23511	347 aa	Predicted RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	S100A11	P31949	105 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	FAU	P35544	74 aa	Known RBP	4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	PABPC1L2A	Q5JQF8	200 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	TMEM91	Q6ZNR0	172 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	KRTAP19-1	Q8IUB9	90 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	ZNF283	Q8N7M2	679 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	MORN4	Q8NDC4	146 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	OR5A1	Q8NGJ0	315 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	CIRBP-AS1	Q8TBR5	109 aa		4.94	□□□□□ -1.62
PFKM-231	ENST00000553055	B9D2	Q9BPU9	175 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms