RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 SNRPD3P62318 126 aaKnown RBP8.52□□□□□ -1.05
TMEM116-218ENST00000552839 UBE2L3P68036 154 aaKnown RBP8.52□□□□□ -1.05
TMEM116-218ENST00000552839 PATE2Q6UY27 113 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 MIR17HGQ75NE6 70 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 STOML3Q8TAV4 291 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 TMED6Q8WW62 240 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 GLMPQ8WWB7 406 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 ZNF414Q96IQ9 312 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 C16orf92Q96LL3 132 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 MS4A6AQ9H2W1 248 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 U3KQE9 123 aa8.52□□□□□ -1.05
TMEM116-218ENST00000552839 IZUMO1RA6ND01 250 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 A8MZ25 164 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 UMAD1C9J7I0 102 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 SPP1P10451 314 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 CMC4P56277 68 aaPredicted RBP8.51□□□□□ -1.05
TMEM116-218ENST00000552839 SPATA31B1PQ5VZV4 182 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 FAM213BQ8TBF2 198 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 PAXXQ9BUH6 204 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 SEPSECSQ9HD40 501 aaKnown RBP8.51□□□□□ -1.05
TMEM116-218ENST00000552839 RFNGQ9Y644 331 aa8.51□□□□□ -1.05
TMEM116-218ENST00000552839 TRAV5A0A0B4J249 113 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 CTXND1A0A1B0GTU2 59 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 OR11H12B2RN74 326 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 TEX46H3BTG2 121 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 LCN15Q6UWW0 184 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 PQLC2Q6ZP29 291 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 BLNKQ8WV28 456 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 LINC00052Q96N35 136 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 SPATA25Q9BR10 227 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 OR51M1Q9H341 326 aa8.5□□□□□ -1.05
TMEM116-218ENST00000552839 TRAV2A0A0B4J234 112 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 HMGB3O15347 200 aaKnown RBP8.49□□□□□ -1.05
TMEM116-218ENST00000552839 OR10J4P0C629 311 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 ZNF688P0C7X2 276 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 RAB5CP51148 216 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 GUK1Q16774 197 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 HAGHQ16775 308 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 DPPA3Q6W0C5 159 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 SLC50A1Q9BRV3 221 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 SLC25A2Q9BXI2 301 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 AAMDCQ9H7C9 122 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 TUBA4BQ9H853 241 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 UBQLN2Q9UHD9 624 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 BOLA1Q9Y3E2 137 aa8.49□□□□□ -1.05
TMEM116-218ENST00000552839 MAP1LC3B2A6NCE7 125 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 H3BTX0 84 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 ISLRO14498 428 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 CXorf1O96002 111 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 SNRPCP09234 159 aaKnown RBP8.48□□□□□ -1.05
TMEM116-218ENST00000552839 PYYP10082 97 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 PSMB3P49720 205 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 PSG9Q00887 426 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 PSMG4Q5JS54 123 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 MORN5Q5VZ52 161 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 FAM90A2PQ658T7 463 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 ZNF738Q8NE65 137 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 RAB24Q969Q5 203 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 PHYHIPLQ96FC7 376 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 MAP1LC3BQ9GZQ8 125 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 RPRMQ9NS64 109 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 TMEM14CQ9P0S9 112 aa8.48□□□□□ -1.05
TMEM116-218ENST00000552839 A0A087X0K7 114 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 A0A1B0GV50 99 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 K7EQG2 157 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 EIF3GO75821 320 aaKnown RBP eCLIP8.47□□□□□ -1.05
TMEM116-218ENST00000552839 ARL14EPLP0DKL9 152 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 HIST1H1EP10412 219 aaKnown RBP8.47□□□□□ -1.05
TMEM116-218ENST00000552839 FAM74A1Q5RGS3 127 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 ALKAL2Q6UX46 152 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 RPP25LQ8N5L8 163 aaKnown RBP8.47□□□□□ -1.05
TMEM116-218ENST00000552839 RNF141Q8WVD5 230 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 HRH4Q9H3N8 390 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 TMEM167BQ9NRX6 74 aa8.47□□□□□ -1.05
TMEM116-218ENST00000552839 ZNF705EA8MWA4 302 aaPredicted RBP8.46□□□□□ -1.06
TMEM116-218ENST00000552839 CD7P09564 240 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 H2AFB1P0C5Y9 115 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 DEFB131AP59861 70 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 PDE6HQ13956 83 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 CMTM2Q8TAZ6 248 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 DCANP1Q8TF63 244 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 SFT2D1Q8WV19 159 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 MAP6D1Q9H9H5 199 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 RETNQ9HD89 108 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 CLEC5AQ9NY25 188 aa8.46□□□□□ -1.06
TMEM116-218ENST00000552839 IFNA7P01567 189 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 HBE1P02100 147 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 STAG3L2P0CL84 134 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 STAG3L3P0CL85 134 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 IGLC2P0DOY2 106 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 GCHFRP30047 84 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 CSN1S1P47710 185 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 SULT1A2P50226 295 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 FGF8P55075 233 aaPredicted RBP8.45□□□□□ -1.06
TMEM116-218ENST00000552839 EBLN2Q6P2I7 272 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 STHQ8IWL8 128 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 IL17DQ8TAD2 202 aa8.45□□□□□ -1.06
TMEM116-218ENST00000552839 FAM167A-AS1Q96KT0 104 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms