RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SERTM2A0A1B0GWG4 89 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 C2orf70A6NJV1 201 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 LY6LH3BQJ8 138 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 IGHV3-48P01763 117 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 LIPFP07098 398 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 IGLC1P0CG04 106 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 PSG1P11464 419 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 S100A7P31151 101 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 Q6AWC8 147 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 EBLN2Q6P2I7 272 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 RNASEKQ6P5S7 137 aaKnown RBP4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 PET117Q6UWS5 81 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 TCF24Q7RTU0 167 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM75Q8N9X5 138 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 OR2D3Q8NGH3 330 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 ORAOV1Q8WV07 137 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 RPEQ96AT9 228 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 PGLYRP4Q96LB8 373 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 RASL11BQ9BPW5 248 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM70Q9BUB7 260 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 SLC25A39Q9BZJ4 359 aaPredicted RBP4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 TMEM191AQ9H0A3 160 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 ST20Q9HBF5 79 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 HSPB8Q9UJY1 196 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 WDFY3Q8IZQ1 3526 aa4.72□□□□□ -1.65
CHMP4A-210ENST00000552620 LOC102724200A0A096LPH7 203 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 IGHV3-72A0A0B4J1Y9 119 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 PPIAL4CA0A0B4J2A2 164 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 FBLL1A6NHQ2 334 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 HSBP1L1C9JCN9 74 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 H3BRN7 92 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 CHEK1O14757 476 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 PPIAL4GP0DN37 164 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 TSPOP30536 169 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 GPR6P46095 362 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 LYZP61626 148 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 BATFQ16520 125 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 LINC00322Q6ZN03 302 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 Q86TA4 180 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 BPIFA4PQ86YQ2 179 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 LY6G5BQ8NDX9 201 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 PRSS33Q8NF86 280 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 OR4F17Q8NGA8 305 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 GTSF1Q8WW33 167 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 SRSF12Q8WXF0 261 aaKnown RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 ZNF48Q96MX3 618 aaPredicted RBP4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 SHANK2-AS3Q9BTD1 123 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 MAP1LC3CQ9BXW4 147 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 RAB1BQ9H0U4 201 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 MS4A6AQ9H2W1 248 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 VPS13AQ96RL7 3174 aa4.71□□□□□ -1.66
CHMP4A-210ENST00000552620 FREM2Q5SZK8 3169 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 TRBV19A0A075B6N1 114 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 A0A1B0GUT8 65 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 WI2-2373I1.2A0A1W2PRP0 233 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 A6NNC1 897 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 SYS1-DBNDD2H3BUS1 97 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 K7EIM0 57 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 LEPROTL1O95214 131 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 CNIH1O95406 144 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 IGKV1-17P01599 117 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 IGLV2-11P01706 119 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 APOHP02749 345 aaPredicted RBP4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 IGLL1P15814 213 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 CNTFRP26992 372 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 HTR1DP28221 377 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 CEACAM3P40198 252 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 KRTAP10-2P60368 255 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 PDE6HQ13956 83 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 PLGLAQ15195 96 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 FBXL19-AS1Q494R0 122 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 Q56UQ5 140 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 RUSC1-AS1Q66K80 236 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 LCN12Q6JVE5 192 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 GOLT1AQ6ZVE7 132 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 COX8CQ7Z4L0 72 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 PRNTQ86SH4 94 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 NPBQ8NG41 125 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 OR11H6Q8NGC7 330 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 PMCHL2Q9BQD1 86 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 FBXL15Q9H469 300 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 RPH3ALQ9UNE2 315 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 PSG8Q9UQ74 426 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 CBY1Q9Y3M2 126 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 ICE1Q9Y2F5 2266 aa4.7□□□□□ -1.66
CHMP4A-210ENST00000552620 SVILO95425 2214 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 IGHV1-24A0A0C4DH33 117 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 OR4C46A6NHA9 309 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 OOSP1A8MZH6 123 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 M0R1W7 72 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 RHODO00212 210 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 MRPS12O15235 138 aaKnown RBP4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 NBR2O15453 112 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 SCGB2A1O75556 95 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 NDUFA3O95167 84 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 NDUFB8O95169 186 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 HLA-DRB1P01911 266 aa4.69□□□□□ -1.66
CHMP4A-210ENST00000552620 NHLRC4P0CG21 123 aaPredicted RBP4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms