RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 LAMB4A4D0S4 1761 aa1.16□□□□□ -2.22
CPNE8-208ENST00000551855 A0A087WX48 190 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 SDC2P34741 201 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 RPL35P42766 123 aaKnown RBP1.15□□□□□ -2.23
CPNE8-208ENST00000551855 SPRNQ5BIV9 151 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 TEX261Q6UWH6 196 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 TMEM35BQ8NCS4 154 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 TMEM254Q8TBM7 123 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 C19orf12Q9NSK7 152 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 LY96Q9Y6Y9 160 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 U3KQ87 197 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 TANC2Q9HCD6 1990 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 CASP8AP2Q9UKL3 1982 aa1.15□□□□□ -2.23
CPNE8-208ENST00000551855 INTS1Q8N201 2190 aaKnown RBP1.15□□□□□ -2.23
CPNE8-208ENST00000551855 DIDO1Q9BTC0 2240 aaKnown RBP1.15□□□□□ -2.23
CPNE8-208ENST00000551855 ZCCHC11Q5TAX3 1644 aaKnown RBP1.15□□□□□ -2.23
CPNE8-208ENST00000551855 TRAV10A0A0B4J240 114 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 LOC107984640A0A0U1RRK4 108 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 TCRBV4S1A1TA0A5B7 111 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 C9orf170A2RU37 121 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 OR2T8A6NH00 312 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 KPNA4O00629 521 aaPredicted RBP1.14□□□□□ -2.23
CPNE8-208ENST00000551855 HCRTO43612 131 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 DHFRP00374 187 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 OR8B8Q15620 311 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 C4orf22Q6V702 233 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 PHF5AQ7RTV0 110 aaKnown RBP1.14□□□□□ -2.23
CPNE8-208ENST00000551855 BRK1Q8WUW1 75 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 CDC42SE1Q9NRR8 79 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 FKBP11Q9NYL4 201 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 ARFGEF3Q5TH69 2177 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 MCM3APO60318 1980 aa1.14□□□□□ -2.23
CPNE8-208ENST00000551855 TNRC6AQ8NDV7 1962 aaKnown RBP1.14□□□□□ -2.23
CPNE8-208ENST00000551855 PTPRFP10586 1907 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 ALPK3Q96L96 1907 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 NCAPD3P42695 1498 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 A0A1B0GW64 132 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 ZNF736B4DX44 427 aaPredicted RBP1.13□□□□□ -2.23
CPNE8-208ENST00000551855 J3QKU1 62 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 PFDN1O60925 122 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 SDC4P31431 198 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 RAB5CP51148 216 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 CDK6Q00534 326 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 VMA21Q3ZAQ7 101 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 TOMM20LQ6UXN7 152 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.13□□□□□ -2.23
CPNE8-208ENST00000551855 LINC00305Q7Z4B0 112 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 RPS19BP1Q86WX3 136 aaKnown RBP1.13□□□□□ -2.23
CPNE8-208ENST00000551855 FAM216BQ8N7L0 139 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 OR5H6Q8NGV6 325 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 OR4C6Q8NH72 309 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 PYDC1Q8WXC3 89 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 ISOC1Q96CN7 298 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 HYLS1Q96M11 299 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 NAA38Q9BRA0 125 aaKnown RBP1.13□□□□□ -2.23
CPNE8-208ENST00000551855 LINC00467Q9BRT7 94 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 CBLN4Q9NTU7 201 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 LAMTOR2Q9Y2Q5 125 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 BCL9O00512 1426 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 TRAPPC8Q9Y2L5 1435 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 ALPK2Q86TB3 2170 aa1.13□□□□□ -2.23
CPNE8-208ENST00000551855 SDK1Q7Z5N4 2213 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 IGHV1-58A0A0C4DH39 117 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 hDV103S1A0JD37 113 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 J3KT08 172 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 MT-ND4LP03901 98 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 IFNA4P05014 189 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 OR10J4P0C629 311 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 ALX1Q15699 326 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 Q5XG85 94 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 TMEM229BQ8NBD8 167 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 OR9Q1Q8NGQ5 310 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 SKA2Q8WVK7 121 aaPredicted RBP1.12□□□□□ -2.23
CPNE8-208ENST00000551855 MUCL1Q96DR8 90 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 BATF3Q9NR55 127 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 HSPB11Q9Y547 144 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 FAM135BQ49AJ0 1406 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 SIP14410 1827 aa1.12□□□□□ -2.23
CPNE8-208ENST00000551855 TCOF1Q13428 1488 aaKnown RBP1.12□□□□□ -2.23
CPNE8-208ENST00000551855 ARHGEF10O15013 1369 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 RTL9Q8NET4 1388 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 DLC1Q96QB1 1528 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 TRAV5A0A0B4J249 113 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 E7EUB6 86 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 C17orf112F2Z3M2 114 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 MRPS14O60783 128 aaKnown RBP1.11□□□□□ -2.23
CPNE8-208ENST00000551855 HYPMO75409 117 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 KLF7O75840 302 aaPredicted RBP1.11□□□□□ -2.23
CPNE8-208ENST00000551855 DNAL4O96015 105 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 PRB1P04280 392 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 CRYGSP22914 178 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 FOXA3P55318 350 aaPredicted RBP1.11□□□□□ -2.23
CPNE8-208ENST00000551855 DSCR4P56555 118 aaPredicted RBP1.11□□□□□ -2.23
CPNE8-208ENST00000551855 ZNF833PQ6ZTB9 187 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 GKN2Q86XP6 184 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 LRRC18Q8N456 261 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 C12orf29Q8N999 325 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 OBSCN-AS1Q96MR7 158 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 PRELID3AQ96N28 172 aa1.11□□□□□ -2.23
CPNE8-208ENST00000551855 LAMTOR3Q9UHA4 124 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms