RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 FAM74A7A6NL05 159 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 PDE6DO43924 150 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 PAGE4O60829 102 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 EIF3GO75821 320 aaKnown RBP eCLIP7.89□□□□□ -1.15
NEK3-203ENST00000551355 CSN3P07498 182 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 INSL3P51460 131 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 RPL11P62913 178 aaKnown RBP7.89□□□□□ -1.15
NEK3-203ENST00000551355 MEF2BQ02080 365 aaPredicted RBP7.89□□□□□ -1.15
NEK3-203ENST00000551355 CST9LP1Q5W188 147 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 TCF24Q7RTU0 167 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 LINC00482Q8N8I6 264 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 OR2K2Q8NGT1 345 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 DYNLRB2Q8TF09 96 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 BLNKQ8WV28 456 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 MCRIP2Q9BUT9 160 aaKnown RBP7.89□□□□□ -1.15
NEK3-203ENST00000551355 AAMDCQ9H7C9 122 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 NRN1Q9NPD7 142 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 OTORQ9NRC9 128 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 ZNF586Q9NXT0 402 aa7.89□□□□□ -1.15
NEK3-203ENST00000551355 TRAV2A0A0B4J234 112 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 C11orf94C9JXX5 98 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 F6UZH7 168 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 H3BQ15 152 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 ID1P41134 155 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 RIPPLY3P57055 190 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 RANP62826 216 aaKnown RBP7.88□□□□□ -1.15
NEK3-203ENST00000551355 HAGHQ16775 308 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 TOR2AQ5JU69 321 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 FAM90A2PQ658T7 463 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 RBPMS2Q6ZRY4 209 aaKnown RBP7.88□□□□□ -1.15
NEK3-203ENST00000551355 LURAP1LQ8IV03 231 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 RXFP4Q8TDU9 374 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 RPUSD4Q96CM3 377 aaKnown RBP7.88□□□□□ -1.15
NEK3-203ENST00000551355 MLXQ9UH92 298 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 PRELID1Q9Y255 219 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 SMAD5-AS1Q9Y6J3 95 aa7.88□□□□□ -1.15
NEK3-203ENST00000551355 TMEM250H0YL14 139 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 ISLRO14498 428 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 CSN1S1P47710 185 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 UBE2G2P60604 165 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 DEFB114Q30KQ6 69 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 HIST2H2BDQ6DRA6 164 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 C5orf17Q8NAS9 161 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 CMTM2Q8TAZ6 248 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 HIST1H2BAQ96A08 127 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 MRPL53Q96EL3 112 aaKnown RBP7.87□□□□□ -1.15
NEK3-203ENST00000551355 Q9H3A6 140 aa7.87□□□□□ -1.15
NEK3-203ENST00000551355 ZNF331Q9NQX6 463 aaPredicted RBP7.87□□□□□ -1.15
NEK3-203ENST00000551355 SERTM2A0A1B0GWG4 89 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 PGPA6NDG6 321 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 DNASE2O00115 360 aaPredicted RBP7.86□□□□□ -1.15
NEK3-203ENST00000551355 TSPAN4O14817 238 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 SAP30O75446 220 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 NDUFB4O95168 129 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 SNRPD3P62318 126 aaKnown RBP7.86□□□□□ -1.15
NEK3-203ENST00000551355 SUMO1P63165 101 aaKnown RBP7.86□□□□□ -1.15
NEK3-203ENST00000551355 ICAM4Q14773 271 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 ADAMTSL5Q6ZMM2 481 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 CCDC28AQ8IWP9 274 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 WFDC9Q8NEX5 89 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 C16orf92Q96LL3 132 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 SPAG8Q99932 426 aaPredicted RBP7.86□□□□□ -1.15
NEK3-203ENST00000551355 RARRES2Q99969 163 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 GPR61Q9BZJ8 451 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 SLC35B3Q9H1N7 401 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 TREM1Q9NP99 234 aa7.86□□□□□ -1.15
NEK3-203ENST00000551355 YTHDF2Q9Y5A9 579 aaKnown RBP7.86□□□□□ -1.15
NEK3-203ENST00000551355 FBLL1A6NHQ2 334 aaKnown RBP7.85□□□□□ -1.15
NEK3-203ENST00000551355 GGTLC3B5MD39 225 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 K7EQM0 130 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 S100A9P06702 114 aaKnown RBP7.85□□□□□ -1.15
NEK3-203ENST00000551355 CD33P20138 364 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 CMC4P56277 68 aaPredicted RBP7.85□□□□□ -1.15
NEK3-203ENST00000551355 CD81P60033 236 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 C9orf66Q5T8R8 295 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 LCN12Q6JVE5 192 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 C17orf77Q96MU5 243 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 MS4A6AQ9H2W1 248 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 EPDR1Q9UM22 224 aa7.85□□□□□ -1.15
NEK3-203ENST00000551355 OR4C46A6NHA9 309 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 SLC17A3O00476 420 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 SOCS3O14543 225 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 IGLV1-51P01701 117 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 SLC25A5P05141 298 aaKnown RBP7.84□□□□□ -1.15
NEK3-203ENST00000551355 ATP5G3P48201 142 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 CD300EQ496F6 205 aaPredicted RBP7.84□□□□□ -1.15
NEK3-203ENST00000551355 FAM74A3Q4VXF1 159 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 DCANP1Q8TF63 244 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 C11orf52Q96A22 123 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 ATG101Q9BSB4 218 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 ATRQ13535 2644 aa7.84□□□□□ -1.15
NEK3-203ENST00000551355 SETD2Q9BYW2 2564 aaPredicted RBP7.84□□□□□ -1.15
NEK3-203ENST00000551355 KRBOX1C9JBD0 128 aa7.83□□□□□ -1.16
NEK3-203ENST00000551355 H3BTX0 84 aa7.83□□□□□ -1.16
NEK3-203ENST00000551355 K7EQG2 157 aa7.83□□□□□ -1.16
NEK3-203ENST00000551355 SRP19P09132 144 aaKnown RBP7.83□□□□□ -1.16
NEK3-203ENST00000551355 SNRPCP09234 159 aaKnown RBP7.83□□□□□ -1.16
NEK3-203ENST00000551355 EDN2P20800 178 aa7.83□□□□□ -1.16
NEK3-203ENST00000551355 PSG3Q16557 428 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms