RNA–Protein interactions for RNA: ENST00000550872.1

CHMP1A-209, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-209ENST00000550872 RPRMQ9NS64 109 aa11.97□□□□□ -0.49
CHMP1A-209ENST00000550872 KIR2DL5BA0A0G2JN68 375 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 KIR2DL5BA0A0G2JPC4 375 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 A0A1W2PPV4 95 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 IGLC2P0DOY2 106 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 PYYP10082 97 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 HIST1H1EP10412 219 aaKnown RBP11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 DEFB1P60022 68 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 SERF2P84101 59 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 GUK1Q16774 197 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 KIR2DL5AQ8N109 375 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 RNF182Q8N6D2 247 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 OR10G4Q8NGN3 311 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 OR10G9Q8NGN4 311 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 OR10G7Q8NGN6 311 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 KIR2DL5BQ8NHK3 375 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 FAM167A-AS1Q96KT0 104 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 TM2D3Q9BRN9 247 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 SLC50A1Q9BRV3 221 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 OR51M1Q9H341 326 aa11.96□□□□□ -0.49
CHMP1A-209ENST00000550872 NBEAL2Q6ZNJ1 2754 aa11.96□□□□□ -0.5
CHMP1A-209ENST00000550872 KANTRA0A1W2PQU2 76 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 UBE2CO00762 179 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 TAS2R45P59539 299 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 EBLN2Q6P2I7 272 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 FAM122CQ6P4D5 195 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 FOXI2Q6ZQN5 318 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 TRPT1Q86TN4 253 aaKnown RBP11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 SPATA25Q9BR10 227 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 PAXXQ9BUH6 204 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 CSTL1Q9H114 145 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF331Q9NQX6 463 aaPredicted RBP11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF586Q9NXT0 402 aa11.95□□□□□ -0.5
CHMP1A-209ENST00000550872 H3BMM0 161 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 SLC17A3O00476 420 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 OR7C2O60412 319 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 PFDN1O60925 122 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 MBP02144 154 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 C1QBP02746 253 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 HLA-DRB4P13762 266 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 HLA-DMBP28068 263 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 PSG3Q16557 428 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 GDF5OSQ5U4N7 250 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 TMUB2Q71RG4 321 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF738Q8NE65 137 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 SAT2Q96F10 170 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 SAV1Q9H4B6 383 aaPredicted RBP11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 HLA-DRB4X5D2U9 266 aa11.94□□□□□ -0.5
CHMP1A-209ENST00000550872 TRBV19A0A075B6N1 114 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 F6UB75 175 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 BCL2L11O43521 198 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 EIF3GO75821 320 aaKnown RBP eCLIP11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 OR10J4P0C629 311 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 NBEAP1P0C6P0 100 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 SPP1P10451 314 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 KHDC3LQ587J8 217 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 BLNKQ8WV28 456 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 RNF141Q8WVD5 230 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 HYLS1Q96M11 299 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF471Q9BX82 626 aaPredicted RBP11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 RETNQ9HD89 108 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 U3KQK5 164 aa11.93□□□□□ -0.5
CHMP1A-209ENST00000550872 A0A0J9YX75 114 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 CDC34P49427 236 aaPredicted RBP11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 CD300CQ08708 224 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 TMEM41BQ5BJD5 291 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 RPP25LQ8N5L8 163 aaKnown RBP11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 OR4B1Q8NGF8 309 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 RCHY1Q96PM5 261 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 CLEC5AQ9NY25 188 aa11.92□□□□□ -0.5
CHMP1A-209ENST00000550872 HMGB3O15347 200 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF253O75346 499 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 CA1P00915 261 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 EIF5AP63241 154 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 PSG9Q00887 426 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 PDE6HQ13956 83 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 DEFB135Q30KP9 77 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 LGALSLQ3ZCW2 172 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 MORN3Q6PF18 240 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 Q6ZWC4 215 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 RPUSD4Q96CM3 377 aaKnown RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 FXYD5Q96DB9 178 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF503Q96F45 646 aa11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 ACTR3CQ9C0K3 210 aaPredicted RBP11.91□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF705FA8MVS1 300 aaPredicted RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 NDUFB4O95168 129 aa11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF705DP0CH99 300 aaPredicted RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 ZNF705BP0CI00 300 aaPredicted RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 PRB4P10163 310 aaPredicted RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 NUTF2P61970 127 aaKnown RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 UBE2L3P68036 154 aaKnown RBP11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 AKR1C8PQ5T2L2 129 aa11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 PQLC2Q6ZP29 291 aa11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 RAB24Q969Q5 203 aa11.9□□□□□ -0.5
CHMP1A-209ENST00000550872 TENM3Q9P273 2699 aa11.89□□□□□ -0.51
CHMP1A-209ENST00000550872 SPRY2O43597 315 aa11.89□□□□□ -0.51
CHMP1A-209ENST00000550872 DUSP14O95147 198 aaKnown RBP11.89□□□□□ -0.51
CHMP1A-209ENST00000550872 ZFP69Q49AA0 526 aa11.89□□□□□ -0.51
CHMP1A-209ENST00000550872 OR8A1Q8NGG7 326 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms