RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 MBP02144 154 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 SUB1P53999 127 aaKnown RBP eCLIP9.72□□□□□ -0.85
CDX2-202ENST00000548877 ERHP84090 104 aaKnown RBP9.72□□□□□ -0.85
CDX2-202ENST00000548877 VWC2Q2TAL6 325 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 ZNF709Q8N972 641 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 SLC24A4Q8NFF2 622 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 GRAMD2BQ96HH9 432 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
CDX2-202ENST00000548877 CELA1Q9UNI1 258 aa9.72□□□□□ -0.85
CDX2-202ENST00000548877 IGHV3OR16-13A0A075B7E8 117 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 IGHV3-74A0A0B4J1X5 117 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 DNASE2O00115 360 aaPredicted RBP9.71□□□□□ -0.86
CDX2-202ENST00000548877 NPY1RP25929 384 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 DLK1P80370 383 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 TOMM20LQ6UXN7 152 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 Q6ZRG5 221 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 FAM210BQ96KR6 192 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 HERC1Q15751 4861 aa9.71□□□□□ -0.86
CDX2-202ENST00000548877 UBE2L5PA0A1B0GUS4 154 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 PMS2P5A8MQ11 134 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 K7EQG2 157 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 APOHP02749 345 aaPredicted RBP9.7□□□□□ -0.86
CDX2-202ENST00000548877 SNCAP37840 140 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 ARL16Q0P5N6 197 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 RAB31Q13636 194 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 TMEM182Q6ZP80 229 aaPredicted RBP9.7□□□□□ -0.86
CDX2-202ENST00000548877 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 LYPD6BQ8NI32 183 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 PBDC1Q9BVG4 233 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 SCRT1Q9BWW7 348 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 HINT2Q9BX68 163 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 SH3BGRL3Q9H299 93 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 ZFAND3Q9H8U3 227 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 NACAE9PAV3 2078 aa9.7□□□□□ -0.86
CDX2-202ENST00000548877 APOBP04114 4563 aaKnown RBP9.69□□□□□ -0.86
CDX2-202ENST00000548877 RNF212Q495C1 297 aa9.69□□□□□ -0.86
CDX2-202ENST00000548877 C2orf83Q53S99 150 aa9.69□□□□□ -0.86
CDX2-202ENST00000548877 SPINK9Q5DT21 86 aa9.69□□□□□ -0.86
CDX2-202ENST00000548877 FAM213BQ8TBF2 198 aa9.69□□□□□ -0.86
CDX2-202ENST00000548877 SMDT1Q9H4I9 107 aa9.69□□□□□ -0.86
CDX2-202ENST00000548877 FGF7P21781 194 aa9.68□□□□□ -0.86
CDX2-202ENST00000548877 TOR2AQ5JU69 321 aa9.68□□□□□ -0.86
CDX2-202ENST00000548877 MAPKAPK5-AS1Q8N8E1 139 aa9.68□□□□□ -0.86
CDX2-202ENST00000548877 TMEM231Q9H6L2 316 aa9.68□□□□□ -0.86
CDX2-202ENST00000548877 NPVFQ9HCQ7 196 aa9.68□□□□□ -0.86
CDX2-202ENST00000548877 TRAV1-1A0A0B4J248 108 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 GNG7O60262 68 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 MT-CO2P00403 227 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 H2AFB1P0C5Y9 115 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 GPX4P36969 197 aaPredicted RBP9.67□□□□□ -0.86
CDX2-202ENST00000548877 PEA15Q15121 130 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 BSXQ3C1V8 233 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 ZNF600Q6ZNG1 722 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 RNASEH2CQ8TDP1 164 aaKnown RBP9.67□□□□□ -0.86
CDX2-202ENST00000548877 DCANP1Q8TF63 244 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 WDR83OSQ9Y284 106 aa9.67□□□□□ -0.86
CDX2-202ENST00000548877 IGLV2-18A0A075B6J9 118 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 SMCO3A2RU48 225 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 CORTO00230 105 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 RPL11P62913 178 aaKnown RBP9.66□□□□□ -0.86
CDX2-202ENST00000548877 ACOT6Q3I5F7 207 aaPredicted RBP9.66□□□□□ -0.86
CDX2-202ENST00000548877 CCDC28AQ8IWP9 274 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 Q8N1X5 172 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 MISP3Q96FF7 219 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 NARS2Q96I59 477 aaKnown RBP9.66□□□□□ -0.86
CDX2-202ENST00000548877 NEU1Q99519 415 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 RSG1Q9BU20 258 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 NPCDR1Q9BY65 106 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 RABAC1Q9UI14 185 aa9.66□□□□□ -0.86
CDX2-202ENST00000548877 PUS1Q9Y606 427 aaKnown RBP eCLIP9.66□□□□□ -0.86
CDX2-202ENST00000548877 IGHV3-66A0A0C4DH42 116 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 A0A1W2PS18 150 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 C16orf90A8MZG2 172 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 CRYBB3P26998 211 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 TAGLN2P37802 199 aaKnown RBP9.65□□□□□ -0.86
CDX2-202ENST00000548877 OPRK1P41145 380 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 NPBWR1P48145 328 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 ETFRF1Q6IPR1 90 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 TEPPQ6URK8 271 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 C1QTNF4Q9BXJ3 329 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 TREM1Q9NP99 234 aa9.65□□□□□ -0.86
CDX2-202ENST00000548877 DNAH5Q8TE73 4624 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 IGHV3-48P01763 117 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 ZNF688P0C7X2 276 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 RNASE2P10153 161 aaKnown RBP9.64□□□□□ -0.87
CDX2-202ENST00000548877 M6PRP20645 277 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 NPPCP23582 126 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 FAM3BP58499 235 aaPredicted RBP9.64□□□□□ -0.87
CDX2-202ENST00000548877 AKR1C1Q04828 323 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 ACTL10Q5JWF8 245 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 ZNF705AQ6ZN79 300 aaPredicted RBP9.64□□□□□ -0.87
CDX2-202ENST00000548877 TMEM144Q7Z5S9 345 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 UBE2DNLQ8IWF7 75 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 MBD3L1Q8WWY6 194 aa9.64□□□□□ -0.87
CDX2-202ENST00000548877 SLC35E1Q96K37 410 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms