RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 TSPOP30536 169 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 TAS2R30P59541 319 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 HIST1H1AQ02539 215 aaPredicted RBP12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 RNF212Q495C1 297 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 OR8A1Q8NGG7 326 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 MITD1Q8WV92 249 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 ARL6Q9H0F7 186 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 NPVFQ9HCQ7 196 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 MGAT4CQ9UBM8 478 aa12.28□□□□□ -0.44
CHMP1A-205ENST00000548650 CENPXA8MT69 81 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 B2MP61769 119 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 ARL16Q0P5N6 197 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 PSG3Q16557 428 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 TEPPQ6URK8 271 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 ZNF546Q86UE3 836 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 OR10P1Q8NGE3 313 aa12.27□□□□□ -0.45
CHMP1A-205ENST00000548650 PRB4P10163 310 aaPredicted RBP12.26□□□□□ -0.45
CHMP1A-205ENST00000548650 C7orf66A4D0T2 115 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 PLA2G10O15496 165 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 MBPP02686 304 aaPredicted RBP12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 CXCL2P19875 107 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 AZU1P20160 251 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 PXDC1Q5TGL8 231 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 S100A7AQ86SG5 101 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 C15orf53Q8NAA6 179 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 RPUSD4Q96CM3 377 aaKnown RBP12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 C20orf85Q9H1P6 137 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 GSKIPQ9P0R6 139 aa12.25□□□□□ -0.45
CHMP1A-205ENST00000548650 CCSO14618 274 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 AGPAT2O15120 278 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 DEFB130BP0DP73 79 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 DEFB130AP0DP74 79 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 RHOBP62745 196 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 LCN15Q6UWW0 184 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 LINC00305Q7Z4B0 112 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 TMEM256Q8N2U0 113 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 MGST2Q99735 147 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 GGACTQ9BVM4 153 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 ZNF331Q9NQX6 463 aaPredicted RBP12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 RNF24Q9Y225 148 aa12.24□□□□□ -0.45
CHMP1A-205ENST00000548650 GOSR2O14653 212 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 LYRM1O43325 122 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 TAS2R60P59551 318 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 MORN5Q5VZ52 161 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 LINC00299Q6ZSB3 139 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 LRRC20Q8TCA0 184 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 SLC50A1Q9BRV3 221 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 CCDC32Q9BV29 185 aa12.23□□□□□ -0.45
CHMP1A-205ENST00000548650 SLC17A3O00476 420 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 SNRPCP09234 159 aaKnown RBP12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 CDKN1BP46527 198 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 FAM3BP58499 235 aaPredicted RBP12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 FCN2Q15485 313 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 S100ZQ8WXG8 99 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 TMEM37Q8WXS4 190 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 LINC01587Q99440 93 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 PTTG2Q9NZH5 202 aa12.22□□□□□ -0.45
CHMP1A-205ENST00000548650 COX7A2P2O60397 106 aa12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 MED14OSP0DP75 135 aa12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 OPCMLQ14982 345 aa12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 RNASE8Q8TDE3 154 aaKnown RBP12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 C11orf1Q9H5F2 150 aa12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 PPP1R14DQ9NXH3 145 aa12.21□□□□□ -0.45
CHMP1A-205ENST00000548650 MUC4Q99102 2169 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 F5H768 121 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 H3BTX0 84 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 ATP5G1P05496 136 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 IGLC2P0DOY2 106 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 ATP5G3P48201 142 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 KIR3DS1Q14943 382 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 BPIFA4PQ86YQ2 179 aa12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 TMEM263Q8WUH6 116 aaKnown RBP12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 PARD6GQ9BYG4 376 aaPredicted RBP12.2□□□□□ -0.46
CHMP1A-205ENST00000548650 RYR1P21817 5038 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 TRAV6A0A075B6T7 132 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 PRAC2D3DTV9 90 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 L7N2F9 121 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 VAMP2P63027 116 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 ZNF846Q147U1 533 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 SOHLH1Q5JUK2 328 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 C1orf134Q5TEV5 83 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 C10orf113Q5VZT2 155 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 BATF3Q9NR55 127 aa12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 TIMM8BQ9Y5J9 83 aaPredicted RBP12.19□□□□□ -0.46
CHMP1A-205ENST00000548650 CBY3A6NI87 242 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 H3BQ15 152 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 H7BYZ3 331 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 TCRBP04435 133 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 HTN1P15515 57 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 CAMLGP49069 296 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 CAV2P51636 162 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 GFI1BQ5VTD9 330 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 ZNF493Q6ZR52 646 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 ZNRF2Q8NHG8 242 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 C20orf144Q9BQM9 153 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 SEC22CQ9BRL7 303 aa12.18□□□□□ -0.46
CHMP1A-205ENST00000548650 ATG101Q9BSB4 218 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms