RNA–Protein interactions for RNA: ENST00000548434.1

RAPGEF3-217, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 5

Gene RAPGEF3, Length 695 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-217ENST00000548434 MGST2Q99735 147 aa11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 GGACTQ9BVM4 153 aa11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 ARL6Q9H0F7 186 aa11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 ARV1Q9H2C2 271 aa11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 ZNF331Q9NQX6 463 aaPredicted RBP11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
RAPGEF3-217ENST00000548434 SMCO3A2RU48 225 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 BOLA2-SMG1P6H3BVE0 249 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 M0R2N4 97 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 AGPAT2O15120 278 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 OR5G3P0C626 314 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 PRB4P10163 310 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 RAP2BP61225 183 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 KIR3DS1Q14943 382 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 PXDC1Q5TGL8 231 aa11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 SAT2Q96F10 170 aaPredicted RBP11.27□□□□□ -0.61
RAPGEF3-217ENST00000548434 TRAV12-2A0A075B6T6 113 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 LYRM9A8MSI8 78 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 S100A7P31151 101 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 B2MP61769 119 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 ZNF738Q8NE65 137 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 C20orf85Q9H1P6 137 aa11.26□□□□□ -0.61
RAPGEF3-217ENST00000548434 PRAC2D3DTV9 90 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 CCSO14618 274 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 INSP01308 110 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 TCRBP04435 133 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 IGLC2P0DOY2 106 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 CXCL2P19875 107 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 DAD1P61803 113 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 FGL1Q08830 312 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 FCN2Q15485 313 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 VWC2Q2TAL6 325 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 GSKIPQ9P0R6 139 aa11.25□□□□□ -0.61
RAPGEF3-217ENST00000548434 H3BQ15 152 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 SLC17A3O00476 420 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 LYRM1O43325 122 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 INPP1P49441 399 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 OPCMLQ14982 345 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 LINC00305Q7Z4B0 112 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 LINC00612Q8N6U2 182 aa11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 RPUSD4Q96CM3 377 aaKnown RBP11.24□□□□□ -0.61
RAPGEF3-217ENST00000548434 ABCA13Q86UQ4 5058 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 IGLV2-18A0A075B6J9 118 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 PRSS29PA6NIE9 313 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 CENPXA8MT69 81 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 SCGB1D2O95969 90 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 HTN3P15516 51 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 HIST1H1AQ02539 215 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 ZNF546Q86UE3 836 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 TMEM256Q8N2U0 113 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 RNASE8Q8TDE3 154 aaKnown RBP11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 CHAC2Q8WUX2 184 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 SEC22CQ9BRL7 303 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 MGAT4CQ9UBM8 478 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 WDR83OSQ9Y284 106 aa11.23□□□□□ -0.61
RAPGEF3-217ENST00000548434 GOSR2O14653 212 aa11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 SNRPCP09234 159 aaKnown RBP11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 TAS2R60P59551 318 aa11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 LCN15Q6UWW0 184 aa11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 ZNF431Q8TF32 576 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 TMEM208Q9BTX3 173 aa11.22□□□□□ -0.61
RAPGEF3-217ENST00000548434 FAM24AA6NFZ4 105 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 CBY3A6NI87 242 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 CDKN1BP46527 198 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 C15orf53Q8NAA6 179 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 ZNRF2Q8NHG8 242 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 C2orf50Q96LR7 162 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 PARD6GQ9BYG4 376 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 DNAJC4Q9NNZ3 241 aa11.21□□□□□ -0.61
RAPGEF3-217ENST00000548434 TRAV6A0A075B6T7 132 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 TRAV5A0A0B4J249 113 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 FAM3BP58499 235 aaPredicted RBP11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 MIC13Q5XKP0 118 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 NRARPQ7Z6K4 114 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 BPIFA4PQ86YQ2 179 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 LINC01587Q99440 93 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 SLC50A1Q9BRV3 221 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 NUDT15Q9NV35 164 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 ZNF586Q9NXT0 402 aa11.2□□□□□ -0.62
RAPGEF3-217ENST00000548434 APOBP04114 4563 aaKnown RBP11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 IGSF23A1L1A6 192 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 H3BTX0 84 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 CST7O76096 145 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 CT45A10P0DMU9 189 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 DEFB130BP0DP73 79 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 DEFB130AP0DP74 79 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 RHOBP62745 196 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 C10orf113Q5VZT2 155 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 S100A7AQ86SG5 101 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 C20orf144Q9BQM9 153 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 RNF24Q9Y225 148 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 DNAH5Q8TE73 4624 aa11.19□□□□□ -0.62
RAPGEF3-217ENST00000548434 NDUFB4O95168 129 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 MED14OSP0DP75 135 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 RPL29P47914 159 aaKnown RBP11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 CAMLGP49069 296 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 GFI1BQ5VTD9 330 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 ZNF493Q6ZR52 646 aa11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 C12orf45Q8N5I9 185 aaPredicted RBP11.18□□□□□ -0.62
RAPGEF3-217ENST00000548434 TMEM252Q8N6L7 170 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms