RNA–Protein interactions for RNA: ENST00000547861.5

CCDC65-203, Transcript of coiled-coil domain containing 65, humanhuman

TSL 2

Gene CCDC65, Length 1,746 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65-203ENST00000547861 PIFOQ8TCI5 191 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 RNF125Q96EQ8 232 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 SHANK2-AS3Q9BTD1 123 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 MEGF9Q9H1U4 602 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 C7orf69Q9H7B7 122 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 THYN1Q9P016 225 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 MRPL27Q9P0M9 148 aaKnown RBP6.31□□□□□ -1.4
CCDC65-203ENST00000547861 TMEM14CQ9P0S9 112 aa6.31□□□□□ -1.4
CCDC65-203ENST00000547861 A0A1B0GV90 55 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 C5orf52A6NGY3 159 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 B4DSR2 109 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 H3BTX0 84 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TGOLN2O43493 480 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TRGC2P03986 189 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 NBEAP1P0C6P0 100 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H1BP16401 226 aaKnown RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 SNRPEP62304 92 aaKnown RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 USF2Q15853 346 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 KLK9Q2XQG4 91 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 KCNIP4Q6PIL6 250 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 ZNF491Q8N8L2 437 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 OR10G8Q8NGN5 311 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 ZNF479Q96JC4 524 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TCEAL7Q9BRU2 100 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 C2orf88Q9BSF0 95 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 HIF1ANQ9NWT6 349 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 KLK9Q9UKQ9 250 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 SOX21Q9Y651 276 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TENM1Q9UKZ4 2725 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 OR2T8A6NH00 312 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 LINC01548A6NM66 108 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 G3V318 75 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 PHOX2AO14813 284 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TGFAP01135 160 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 AMY1AP04745 511 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 SLC25A5P05141 298 aaKnown RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 FCGR2BP31994 310 aaPredicted RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 RANP62826 216 aaKnown RBP6.3□□□□□ -1.4
CCDC65-203ENST00000547861 OR5I1Q13606 314 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 PET117Q6UWS5 81 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 IMMP2LQ96T52 175 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 Q9H3A6 140 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 SRD5A3Q9H8P0 318 aa6.3□□□□□ -1.4
CCDC65-203ENST00000547861 TRBV9A0A0B4J1U6 114 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 H3BUX3 64 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 AP4M1O00189 453 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 MRPS12O15235 138 aaKnown RBP6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BKO60814 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 GCGP01275 180 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 TYMSP04818 313 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BJP06899 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BOP23527 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BBP33778 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 CRIP2P52943 208 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-203ENST00000547861 FAM3BP58499 235 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BDP58876 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BCP62807 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 RHOGP84095 191 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 SLAQ13239 276 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST2H2BEQ16778 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-203ENST00000547861 SHISA2Q6UWI4 295 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 BCL6BQ8N143 479 aaPredicted RBP6.29□□□□□ -1.4
CCDC65-203ENST00000547861 C5orf17Q8NAS9 161 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 ZNF502Q8TBZ5 544 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 VN1R17PQ8TDU5 208 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 FRZBQ92765 325 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BHQ93079 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 LINC00479Q96M42 142 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BNQ99877 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H2BMQ99879 126 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 ZNF586Q9NXT0 402 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 V9GYV3 84 aa6.29□□□□□ -1.4
CCDC65-203ENST00000547861 TRAV34A0A0B4J273 112 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 PGPA6NDG6 321 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 A6NDX4 124 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 PPP5D1E7EU14 171 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 M0QZK8 103 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 SLC17A3O00476 420 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 ISLRO14498 428 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 SCGB2A1O75556 95 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 IGLC2P0DOY2 106 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 HIST1H1EP10412 219 aaKnown RBP6.28□□□□□ -1.4
CCDC65-203ENST00000547861 GATA3P23771 443 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 ADMP35318 185 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 AKR1D1P51857 326 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 FABP9Q0Z7S8 132 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 LY6EQ16553 131 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 LINC01356Q8N9X3 169 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 NHLRC2Q8NBF2 726 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 CHRDL1Q9BU40 450 aa6.28□□□□□ -1.4
CCDC65-203ENST00000547861 OTORQ9NRC9 128 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms