RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 S100A7P31151 101 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 CCR6P51684 374 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 TAS2R19P59542 299 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 SMCO1Q147U7 214 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 CCDC28AQ8IWP9 274 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 TMEM229BQ8NBD8 167 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 IL22RA2Q969J5 263 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 VSIG2Q96IQ7 327 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 C20orf144Q9BQM9 153 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 TMEM147Q9BVK8 224 aa9.17□□□□□ -0.94
CCDC59-202ENST00000547758 KRTAP29-1A8MX34 341 aaPredicted RBP9.16□□□□□ -0.94
CCDC59-202ENST00000547758 SNURFLB1AK76 121 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 GATA2P23769 480 aaPredicted RBP9.16□□□□□ -0.94
CCDC59-202ENST00000547758 RAB11AP62491 216 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 SURF2Q15527 256 aaPredicted RBP9.16□□□□□ -0.94
CCDC59-202ENST00000547758 FAAP20Q6NZ36 180 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 STEAP1BQ6NZ63 245 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 BPIFCQ8NFQ6 507 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 Q9H521 79 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 PRR13Q9NZ81 148 aa9.16□□□□□ -0.94
CCDC59-202ENST00000547758 FAM25AB3EWG3 89 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 FAM25CB3EWG5 89 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 FAM25GB3EWG6 89 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 H3BRN7 92 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 PRB4P10163 310 aaPredicted RBP9.15□□□□□ -0.94
CCDC59-202ENST00000547758 CXCL3P19876 107 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 KIR3DS1Q14943 382 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 PSG3Q16557 428 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 TMEM182Q6ZP80 229 aaPredicted RBP9.15□□□□□ -0.94
CCDC59-202ENST00000547758 TMED4Q7Z7H5 227 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 YIPF6Q96EC8 236 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 TMEM70Q9BUB7 260 aa9.15□□□□□ -0.94
CCDC59-202ENST00000547758 PAIP2BQ9ULR5 123 aaKnown RBP9.15□□□□□ -0.94
CCDC59-202ENST00000547758 LRP1Q07954 4544 aaKnown RBP9.14□□□□□ -0.95
CCDC59-202ENST00000547758 A0A0B4J2A0 478 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 RPL7P18124 248 aaKnown RBP9.14□□□□□ -0.95
CCDC59-202ENST00000547758 SERTAD4-AS1Q5TG53 156 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 Q6ZTI0 123 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 OR1S1Q8NH92 325 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 RPUSD4Q96CM3 377 aaKnown RBP9.14□□□□□ -0.95
CCDC59-202ENST00000547758 SHPKQ9UHJ6 478 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 GPR132Q9UNW8 380 aa9.14□□□□□ -0.95
CCDC59-202ENST00000547758 A0A087X0K7 114 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 IAPPP10997 89 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 AKR1C4P17516 323 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 DAZ2Q13117 558 aaKnown RBP9.13□□□□□ -0.95
CCDC59-202ENST00000547758 GFI1BQ5VTD9 330 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 LYZL2Q7Z4W2 148 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 SYT8Q8NBV8 401 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 LRRC20Q8TCA0 184 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 SHANK2-AS3Q9BTD1 123 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 PARD6GQ9BYG4 376 aaPredicted RBP9.13□□□□□ -0.95
CCDC59-202ENST00000547758 EXTL2Q9UBQ6 330 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 KCNIP3Q9Y2W7 256 aa9.13□□□□□ -0.95
CCDC59-202ENST00000547758 TRGV2A0A075B6R0 118 aa9.12□□□□□ -0.95
CCDC59-202ENST00000547758 DISC1C4P0D8 188 aa9.12□□□□□ -0.95
CCDC59-202ENST00000547758 NCS1P62166 190 aa9.12□□□□□ -0.95
CCDC59-202ENST00000547758 HIGD1AQ9Y241 93 aa9.12□□□□□ -0.95
CCDC59-202ENST00000547758 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
CCDC59-202ENST00000547758 TRAV9-2A0A087WT02 112 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 IGLV5-52A0A0A0MRZ9 124 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 PRSS46E5RG02 174 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 RAP2BP61225 183 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 AKR1C1Q04828 323 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 MZT2AQ6P582 158 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 CCDC190Q86UF4 302 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 MSRB1Q9NZV6 116 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
CCDC59-202ENST00000547758 NPIPB6E9PJ23 425 aa9.1□□□□□ -0.95
CCDC59-202ENST00000547758 PLA2G1BP04054 148 aaKnown RBP9.1□□□□□ -0.95
CCDC59-202ENST00000547758 VBP1P61758 197 aa9.1□□□□□ -0.95
CCDC59-202ENST00000547758 SSBP1Q04837 148 aaKnown RBP9.1□□□□□ -0.95
CCDC59-202ENST00000547758 C15orf40Q8WUR7 153 aa9.1□□□□□ -0.95
CCDC59-202ENST00000547758 LINC00467Q9BRT7 94 aa9.1□□□□□ -0.95
CCDC59-202ENST00000547758 FAT3Q8TDW7 4589 aa9.1□□□□□ -0.95
CCDC59-202ENST00000547758 PITX3O75364 302 aa9.09□□□□□ -0.95
CCDC59-202ENST00000547758 HYPMO75409 117 aa9.09□□□□□ -0.95
CCDC59-202ENST00000547758 CYP2G1PQ6ZSU1 146 aa9.09□□□□□ -0.95
CCDC59-202ENST00000547758 NTN5Q8WTR8 489 aaPredicted RBP9.09□□□□□ -0.95
CCDC59-202ENST00000547758 PRRT1Q99946 306 aa9.09□□□□□ -0.95
CCDC59-202ENST00000547758 PYGO2Q9BRQ0 406 aa9.09□□□□□ -0.95
CCDC59-202ENST00000547758 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 TRAV12-3A0A0B4J271 114 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 J3KRW8 73 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 K7EP13 123 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 ZNF324O75467 553 aaPredicted RBP9.08□□□□□ -0.96
CCDC59-202ENST00000547758 IL5P05113 134 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 OR5G3P0C626 314 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 AKAIN1P0CW23 69 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 CXCL2P19875 107 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 RPP30P78346 268 aaKnown RBP9.08□□□□□ -0.96
CCDC59-202ENST00000547758 SRPXP78539 464 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 LYPD5Q6UWN5 251 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 ACOT7LQ6ZUV0 252 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 OR51S1Q8NGJ8 323 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 DEFB104AQ8WTQ1 72 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 AP3S1Q92572 193 aa9.08□□□□□ -0.96
CCDC59-202ENST00000547758 CIB3Q96Q77 187 aaPredicted RBP9.08□□□□□ -0.96
CCDC59-202ENST00000547758 ZNF331Q9NQX6 463 aaPredicted RBP9.08□□□□□ -0.96
CCDC59-202ENST00000547758 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms