RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 C6orf15Q6UXA7 325 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 FAM167A-AS1Q96KT0 104 aa9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 LINC00312Q9Y6C7 94 aa9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 TET2Q6N021 2002 aaPredicted RBP9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 BRI3O95415 125 aa9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 FHL3Q13643 280 aa9.6□□□□□ -0.87
RBFOX1-208ENST00000547372 DSPP15924 2871 aaKnown RBP9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 TRGV5A0A0B4J1U4 118 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 PATE3B3GLJ2 98 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 HBDP02042 147 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 MEOX1P50221 254 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 B3GALT5-AS1P59052 145 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 MZT1Q08AG7 82 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 TTTY12Q9BZ98 90 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE12JA6NER3 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 FAM90A9PA6NNJ1 464 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 NDUFS7O75251 213 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE7O76087 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE12FP0CL80 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE12GP0CL81 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE12IP0CL82 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 GAGE4Q13068 117 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 ZNF562Q6V9R5 426 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 OR1L8Q8NGR8 309 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 FOXC2Q99958 501 aa9.59□□□□□ -0.87
RBFOX1-208ENST00000547372 TMEM213A2RRL7 107 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 C15orf61A6NNL5 157 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 M0R1B8 84 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 CKS2P33552 79 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 KIR2DS2P43631 304 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 KLRD1Q13241 179 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 C3orf36Q3SXR2 165 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 C10orf55Q5SWW7 151 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 UTF1Q5T230 341 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 ITLN1Q8WWA0 313 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.88
RBFOX1-208ENST00000547372 GAGE2BQ13066 116 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 GAGE2EQ4V326 116 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 GAGE2DQ9UEU5 116 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 NCKAP5O14513 1909 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 A0A096LNJ9 63 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 TRGV8A0A0C4DH27 118 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 TNFRSF1AP19438 455 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNF134P52741 427 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 Q6AWC8 147 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNF502Q8TBZ5 544 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 CCL13Q99616 98 aa9.58□□□□□ -0.88
RBFOX1-208ENST00000547372 SS18L1O75177 396 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 SAA2P0DJI9 122 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNRD1Q9P1U0 126 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 IL4P05112 153 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 SCGB1C2P0DMR2 95 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNF766Q5HY98 468 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 EXOC3-AS1Q8N2X6 119 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 PHLDA1Q8WV24 401 aaPredicted RBP9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 TRAV40A0A0B4J280 105 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 NDUFA3O95167 84 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 ODF1Q14990 250 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 ZFP2Q6ZN57 461 aa9.57□□□□□ -0.88
RBFOX1-208ENST00000547372 ATP5J2P56134 94 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 SOX21Q9Y651 276 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 C10orf142B7Z368 130 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 RRN3P1Q2M238 152 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 MAPKAPK5-AS1Q8N8E1 139 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 FAM110AQ9BQ89 295 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 TRAV8-2A0A0B4J237 113 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 HOXA3O43365 443 aaPredicted RBP9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 LEPP41159 167 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 FXYD5Q96DB9 178 aa9.56□□□□□ -0.88
RBFOX1-208ENST00000547372 SNCGO76070 127 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 IGKV1-16P04430 117 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 EVI2AP22794 236 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 PATE2Q6UY27 113 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 MRPL32Q9BYC8 188 aaKnown RBP9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 TMEM8BA6NDV4 472 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 DLL1O00548 723 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 LAMTOR5O43504 91 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 TWIST1Q15672 202 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 C1orf229Q6ZS94 237 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 Q9H3A6 140 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 TRANK1O15050 2925 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 HAX1O00165 279 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 IGLV3-19P01714 112 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 IGKCP01834 107 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 ORM1P02763 201 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 CCL11P51671 97 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 ORMDL3Q8N138 153 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 SMRP1Q8NCR6 262 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 DPF1Q92782 380 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 ZNF576Q9H609 170 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 C7orf69Q9H7B7 122 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 YAE1D1Q9NRH1 226 aa9.55□□□□□ -0.88
RBFOX1-208ENST00000547372 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 LINC01549A6NIU2 74 aa9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 PRB3Q04118 309 aaPredicted RBP9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 CD69Q07108 199 aa9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 SRSF9Q13242 221 aaKnown RBP eCLIP9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 FAM159AQ6UWV7 190 aa9.54□□□□□ -0.88
RBFOX1-208ENST00000547372 SIT1Q9Y3P8 196 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms