RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 C7orf69Q9H7B7 122 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 PLEKHA3Q9HB20 300 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 HILPDAQ9Y5L2 63 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 IGHV3OR16-10A0A075B7F0 116 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 IGHV3-72A0A0B4J1Y9 119 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 K7ERU9 68 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 CD5LO43866 347 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 MAJINQ3KP22 176 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 Q56UQ5 140 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 MS4A6AQ9H2W1 248 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 DPM3Q9P2X0 92 aa13.07□□□□□ -0.32
BRF1-208ENST00000546997 SOX21Q9Y651 276 aaPredicted RBP13.07□□□□□ -0.32
BRF1-208ENST00000546997 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 SONP18583 2426 aaKnown RBP13.06□□□□□ -0.32
BRF1-208ENST00000546997 TRAV40A0A0B4J280 105 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 IGHV1-3A0A0C4DH29 117 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 A0A1W2PPI3 338 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 GGTLC3B5MD39 225 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 TGFAP01135 160 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 AVPP01185 164 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 OR5AL1P0C617 328 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 TCL1AP56279 114 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 ATOH7Q8N100 152 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 DYNAPQ8N1N2 210 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 ZNF503Q96F45 646 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 AJUBAQ96IF1 538 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 SERTAD4Q9NUC0 356 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 WASHC3Q9Y3C0 194 aa13.06□□□□□ -0.32
BRF1-208ENST00000546997 C8orf88P0DMB2 117 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 RNF151Q2KHN1 245 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 BVES-AS1Q5T3Y7 98 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 SLC25A34Q6PIV7 304 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 VPS25Q9BRG1 176 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 SETXQ7Z333 2677 aaKnown RBP13.05□□□□□ -0.32
BRF1-208ENST00000546997 IGHV4-38-2P0DP08 117 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 MGST1P10620 155 aaKnown RBP13.05□□□□□ -0.32
BRF1-208ENST00000546997 MC5RP33032 325 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 SAA4P35542 130 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 SLC35B1P78383 322 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 RUSC1-AS1Q66K80 236 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 Q6ZVH6 145 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 NHLRC2Q8NBF2 726 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 TMEM167AQ8TBQ9 72 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 PMCHL2Q9BQD1 86 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 CSTL1Q9H114 145 aa13.05□□□□□ -0.32
BRF1-208ENST00000546997 OR4C46A6NHA9 309 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 IGLV2-23P01705 113 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 GATA3P23771 443 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 MFAP2P55001 183 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 RPL8P62917 257 aaKnown RBP13.04□□□□□ -0.32
BRF1-208ENST00000546997 MOB3BQ86TA1 216 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 OR4A5Q8NH83 315 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 VSTM2AQ8TAG5 236 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 TMEM191AQ9H0A3 160 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 NDUFA4L2Q9NRX3 87 aa13.04□□□□□ -0.32
BRF1-208ENST00000546997 A0A1B0GXF2 115 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 TIMM23O14925 209 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 NPFFO15130 113 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 HIST1H1EP10412 219 aaKnown RBP13.03□□□□□ -0.32
BRF1-208ENST00000546997 CEACAM3P40198 252 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 MPV17L2Q567V2 206 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 ETFRF1Q6IPR1 90 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 BRD3OSQ6XYD6 125 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 NUP35Q8NFH5 326 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 RITA1Q96K30 269 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 SLC25A33Q9BSK2 321 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 HSBP1L1C9JCN9 74 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 OR7C2O60412 319 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 C2orf83Q53S99 150 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 MINOS1Q5TGZ0 78 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 RNASEKQ6P5S7 137 aaKnown RBP13.03□□□□□ -0.32
BRF1-208ENST00000546997 MINOS1-NBL1R4GNA1 71 aa13.03□□□□□ -0.32
BRF1-208ENST00000546997 IGHV1-69DA0A0B4J2H0 117 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 SYS1-DBNDD2H3BUS1 97 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 IGHV1-69P01742 117 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 KLF17Q5JT82 389 aaPredicted RBP13.02□□□□□ -0.32
BRF1-208ENST00000546997 FAM120AOSQ5T036 256 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 PRR27Q6MZM9 219 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 OR10W1Q8NGF6 305 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 OR1L8Q8NGR8 309 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 CFHR4Q92496 578 aa13.02□□□□□ -0.32
BRF1-208ENST00000546997 PEF1Q9UBV8 284 aaKnown RBP13.02□□□□□ -0.32
BRF1-208ENST00000546997 E7EUB6 86 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 INS-IGF2F8WCM5 200 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 RNASE2P10153 161 aaKnown RBP13.01□□□□□ -0.33
BRF1-208ENST00000546997 CD24P25063 80 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 HIST1H1AQ02539 215 aaPredicted RBP13.01□□□□□ -0.33
BRF1-208ENST00000546997 CT83Q5H943 113 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 GDF5OSQ5U4N7 250 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 ACTL6BO94805 426 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 NUDT3O95989 172 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 LGALS7P47929 136 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 NUDT11Q96G61 164 aa13.01□□□□□ -0.33
BRF1-208ENST00000546997 ZNF430Q9H8G1 570 aaPredicted RBP13.01□□□□□ -0.33
BRF1-208ENST00000546997 CHTOPQ9Y3Y2 248 aaKnown RBP13.01□□□□□ -0.33
BRF1-208ENST00000546997 CGB1A6NKQ9 187 aa13□□□□□ -0.33
BRF1-208ENST00000546997 BPIFB3P59826 476 aa13□□□□□ -0.33
BRF1-208ENST00000546997 TCF24Q7RTU0 167 aa13□□□□□ -0.33
BRF1-208ENST00000546997 CACNG8Q8WXS5 425 aa13□□□□□ -0.33
BRF1-208ENST00000546997 SCRT2Q9NQ03 307 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms