RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 IBA57Q5T440 356 aaKnown RBP9.25□□□□□ -0.93
CCDC38-202ENST00000546386 BPIFA4PQ86YQ2 179 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 CMTM2Q8TAZ6 248 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 SMAD5-AS1Q9Y6J3 95 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 AGRNO00468 2067 aa9.25□□□□□ -0.93
CCDC38-202ENST00000546386 IER3P46695 156 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
CCDC38-202ENST00000546386 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
CCDC38-202ENST00000546386 ATP5G2Q06055 141 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 Q6ZQT7 251 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 A6NDX4 124 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 ERCC8Q13216 396 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 C18orf65Q6ZTR6 163 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 IGF2BP2-AS1Q96M15 143 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 C8orf49Q96NF6 230 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 BIN3Q9NQY0 253 aa9.24□□□□□ -0.93
CCDC38-202ENST00000546386 TRBV19A0A075B6N1 114 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 TRAV20A0A0B4J274 112 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 WI2-2373I1.2A0A1W2PRP0 233 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 H3BRN7 92 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 TSPAN9O75954 239 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 TCRAP04437 139 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 DEFB136Q30KP8 78 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 GBGT1Q8N5D6 347 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 OR4F17Q8NGA8 305 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 GPR61Q9BZJ8 451 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 V9GYV3 84 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 NSD1Q96L73 2696 aaPredicted RBP9.23□□□□□ -0.93
CCDC38-202ENST00000546386 ZNF785A8K8V0 405 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 PRAC2D3DTV9 90 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 CAMPP49913 170 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 TM4SF20Q53R12 229 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 C11orf52Q96A22 123 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 SSBP4Q9BWG4 385 aaPredicted RBP9.23□□□□□ -0.93
CCDC38-202ENST00000546386 C2CD3Q4AC94 2353 aa9.23□□□□□ -0.93
CCDC38-202ENST00000546386 HIST1H1EP10412 219 aaKnown RBP9.22□□□□□ -0.93
CCDC38-202ENST00000546386 MYCNOSP40205 109 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 NUDT10Q8NFP7 164 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 NUDT11Q96G61 164 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 RABAC1Q9UI14 185 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 TRBV9A0A0B4J1U6 114 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 CLPSL1A2RUU4 121 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 RPLP1P05386 114 aaKnown RBP9.22□□□□□ -0.93
CCDC38-202ENST00000546386 IGLC2P0DOY2 106 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 CD33P20138 364 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 ARL3P36405 182 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 CDPF1Q6NVV7 123 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 SIGLEC15Q6ZMC9 328 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 WFDC3Q8IUB2 231 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 TMEM75Q8N9X5 138 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 RNF2Q99496 336 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 VGLL1Q99990 258 aa9.22□□□□□ -0.93
CCDC38-202ENST00000546386 CXorf65A6NEN9 183 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 IFITM10A6NMD0 228 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 F2Z2F3 143 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 TGOLN2O43493 480 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 TFPI2P48307 235 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 KHDC1LQ5JSQ8 128 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 OR4X2Q8NGF9 303 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 OR5R1Q8NH85 324 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 SRSF8Q9BRL6 282 aaKnown RBP9.21□□□□□ -0.93
CCDC38-202ENST00000546386 CTDSP1Q9GZU7 261 aa9.21□□□□□ -0.93
CCDC38-202ENST00000546386 C5orf52A6NGY3 159 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 SPRY2O43597 315 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 DSCR9P59020 149 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 PLP1P60201 277 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 ANAPC16Q96DE5 110 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 TMEM242Q9NWH2 141 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 TRAPPC1Q9Y5R8 145 aa9.21□□□□□ -0.94
CCDC38-202ENST00000546386 MRPS12O15235 138 aaKnown RBP9.2□□□□□ -0.94
CCDC38-202ENST00000546386 PPIFP30405 207 aaKnown RBP9.2□□□□□ -0.94
CCDC38-202ENST00000546386 YPEL3P61236 119 aaPredicted RBP9.2□□□□□ -0.94
CCDC38-202ENST00000546386 OR1L6Q8NGR2 347 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 TMEM68Q96MH6 324 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 ATG101Q9BSB4 218 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 ZFAND3Q9H8U3 227 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 CDC42EP3Q9UKI2 254 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 IGLV2-11P01706 119 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 IGHG2P01859 326 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 FOLR2P14207 255 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 RAB9AP51151 201 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 SIGLECL1Q8N7X8 197 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 ARL2-SNX15V9GYD0 113 aa9.2□□□□□ -0.94
CCDC38-202ENST00000546386 TRBV24-1A0A075B6N3 115 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 FAM181BA6NEQ2 426 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 NUPR1O60356 82 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 FABP4P15090 132 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 LOXL1Q08397 574 aaPredicted RBP9.19□□□□□ -0.94
CCDC38-202ENST00000546386 KCNIP4Q6PIL6 250 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 C5orf17Q8NAS9 161 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 STXBP6Q8NFX7 210 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 TRAV30A0A087WSZ9 112 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 F6UB75 175 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 BMPR1BO00238 502 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 RPEL1Q2QD12 228 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 ZC2HC1AQ96GY0 325 aa9.19□□□□□ -0.94
CCDC38-202ENST00000546386 PGLYRP4Q96LB8 373 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms