RNA–Protein interactions for RNA: ENST00000545308.5

SNHG1-222, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-222ENST00000545308 TUBA4BQ9H853 241 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 BCL2L10Q9HD36 194 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 FIS1Q9Y3D6 152 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 LINC00588Q9Y4M8 146 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DNAJC15Q9Y5T4 150 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 DYNC2H1Q8NCM8 4307 aaKnown RBP2.21□□□□□ -2.06
SNHG1-222ENST00000545308 RYR1P21817 5038 aa2.21□□□□□ -2.06
SNHG1-222ENST00000545308 TRAPPC13A5PLN9 417 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 NUPR2A6NF83 97 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 EVPLLA8MZ36 301 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 M0R036 132 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 RBP4P02753 201 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 ASAH2BP0C7U1 165 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 OR13C7P0DN81 318 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 CRABP1P29762 137 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 PPP1CCP36873 323 aaKnown RBP2.2□□□□□ -2.06
SNHG1-222ENST00000545308 GABRA2P47869 451 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 TCTAP57738 103 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 LINC00313P59037 77 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 ACTBP60709 375 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 MRPS15P82914 257 aaKnown RBP2.2□□□□□ -2.06
SNHG1-222ENST00000545308 TMEM267Q0VDI3 215 aaPredicted RBP2.2□□□□□ -2.06
SNHG1-222ENST00000545308 PPP1R1AQ13522 171 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 APOFQ13790 326 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 SPRNQ5BIV9 151 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 FAM201AQ5SY85 155 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 PRR9Q5T870 116 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 LGALS9CQ6DKI2 356 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 LCN8Q6JVE9 175 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 DHRS4L2Q6PKH6 230 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 COMMD7Q86VX2 200 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 CLECL1Q8IZS7 167 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 ZNF561Q8N587 486 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 C1orf64Q8NEQ6 169 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 OR2T27Q8NH04 317 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 PTH2Q96A98 100 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 ACY3Q96HD9 319 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 OR4C12Q96R67 309 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 CCL13Q99616 98 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 FKBP14Q9NWM8 211 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 RASL12Q9NYN1 266 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 SACSQ9NZJ4 4579 aa2.2□□□□□ -2.06
SNHG1-222ENST00000545308 RYR2Q92736 4967 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 IGKV1D-37A0A075B6S9 117 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 FUOMA2VDF0 154 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 TMEM210A6NLX4 147 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 OOSP1A8MZH6 123 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 LECT2O14960 151 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 TGOLN2O43493 480 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 CNIH1O95406 144 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 SERPINA1P01009 418 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 IGHV3-53P01767 116 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 RAB13P51153 203 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 CXCR4P61073 352 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 RPS11P62280 158 aaKnown RBP eCLIP2.19□□□□□ -2.06
SNHG1-222ENST00000545308 RPL18Q07020 188 aaKnown RBP2.19□□□□□ -2.06
SNHG1-222ENST00000545308 KLRD1Q13241 179 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 KRTAP25-1Q3LHN0 102 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 Q6ZQT7 251 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 ATP5L2Q7Z4Y8 100 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 NAA40Q86UY6 237 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 C10orf111Q8N326 155 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 SLC35F6Q8N357 371 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 OR11H6Q8NGC7 330 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 OR51H1Q8NH63 302 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 LZICQ8WZA0 190 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 ADAT1Q9BUB4 502 aaKnown RBP2.19□□□□□ -2.06
SNHG1-222ENST00000545308 TPT1P8Q9HAU6 139 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 BABAM2Q9NXR7 383 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 ZNF391Q9UJN7 358 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 ERGIC3Q9Y282 383 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 POLR1DQ9Y2S0 133 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 NDUFAF1Q9Y375 327 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 WASHC3Q9Y3C0 194 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 MPC1Q9Y5U8 109 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 ALG5Q9Y673 324 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 R4GN34 69 aa2.19□□□□□ -2.06
SNHG1-222ENST00000545308 IGKV1D-42A0A075B6H8 117 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 TRBV24-1A0A075B6N3 115 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 C17orf98A8MV24 154 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 OVOL1O14753 267 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 SH2D1AO60880 128 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 IFNA5P01569 189 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 IFNA14P01570 189 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 C1QCP02747 245 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 TSPAN19P0C672 248 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 ZNF728P0DKX0 622 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 MYL12AP19105 171 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 RPL12P30050 165 aaKnown RBP2.18□□□□□ -2.06
SNHG1-222ENST00000545308 NKX2-5P52952 324 aaPredicted RBP2.18□□□□□ -2.06
SNHG1-222ENST00000545308 CDK6Q00534 326 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 DHRS2Q13268 280 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 C10orf91Q5T1B1 145 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 CD200R1LQ6Q8B3 271 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 SLC35E3Q7Z769 313 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 C10orf67Q8IYJ2 551 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 BPIFB6Q8NFQ5 453 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 OR11H1Q8NG94 326 aa2.18□□□□□ -2.06
SNHG1-222ENST00000545308 OR1M1Q8NGA1 313 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 250.4 ms