RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 WDR73Q6P4I2 378 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 GNB1LQ9BYB4 327 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 MRPL18Q9H0U6 180 aaKnown RBP12.89□□□□□ -0.35
CHFR-224ENST00000545046 ZNF492Q9P255 531 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 SVEP1Q4LDE5 3571 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 CELSR1Q9NYQ6 3014 aa12.89□□□□□ -0.35
CHFR-224ENST00000545046 DIRC3C9JPN6 131 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 IGLV2-11P01706 119 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 TPPP2P59282 170 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 BLCAPP62952 87 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 SNURFLB1AK76 121 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 DEFB112Q30KQ8 113 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 COA6Q5JTJ3 125 aaKnown RBP12.88□□□□□ -0.35
CHFR-224ENST00000545046 Q5PR19 223 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 NOL4LQ96MY1 436 aaPredicted RBP12.88□□□□□ -0.35
CHFR-224ENST00000545046 ZFP30Q9Y2G7 519 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 FBN2P35556 2912 aa12.88□□□□□ -0.35
CHFR-224ENST00000545046 BRI3O95415 125 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 P01737 135 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 MT-ND6P03923 174 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 IGHV4-31P0DP07 118 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 PPIFP30405 207 aaKnown RBP12.87□□□□□ -0.35
CHFR-224ENST00000545046 SLC35B1P78383 322 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 PSG3Q16557 428 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 TSKUQ8WUA8 353 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 NAT8BQ9UHF3 227 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 SMAD5-AS1Q9Y6J3 95 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 SERTM2A0A1B0GWG4 89 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 ARL6IP6Q8N6S5 226 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 USMG5Q96IX5 58 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 RPP21Q9H633 154 aaKnown RBP12.87□□□□□ -0.35
CHFR-224ENST00000545046 PSG8Q9UQ74 426 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 CR1P17927 2039 aa12.87□□□□□ -0.35
CHFR-224ENST00000545046 C19orf71A6NCJ1 209 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 ZNF785A8K8V0 405 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 M0R3E3 92 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 BUB3O43684 328 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 ZNF253O75346 499 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 MRPL54Q6P161 138 aaKnown RBP12.86□□□□□ -0.35
CHFR-224ENST00000545046 CIARTQ8N365 385 aaPredicted RBP12.86□□□□□ -0.35
CHFR-224ENST00000545046 METTL26Q96S19 204 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 ZNF331Q9NQX6 463 aaPredicted RBP12.86□□□□□ -0.35
CHFR-224ENST00000545046 A8MWL6 223 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 FABP4P15090 132 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 ARL3P36405 182 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 LINC00322Q6ZN03 302 aaPredicted RBP12.86□□□□□ -0.35
CHFR-224ENST00000545046 PRSS22Q9GZN4 317 aa12.86□□□□□ -0.35
CHFR-224ENST00000545046 CLPSL1A2RUU4 121 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 FRMD6-AS1P0C7T7 363 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 PF4V1P10720 104 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 RAB4BP61018 213 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 CT83Q5H943 113 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 NUP35Q8NFH5 326 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 OR10D4PQ8NGN7 298 aa12.85□□□□□ -0.35
CHFR-224ENST00000545046 IGHV4-59P01825 116 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 C1orf194Q5T5A4 169 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 RASL11AQ6T310 242 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 Q6ZS46 218 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 GBGT1Q8N5D6 347 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 A0A087X0K7 114 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 TMEM136Q6ZRR5 245 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 Q96MF0 132 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 NEU1Q99519 415 aa12.84□□□□□ -0.35
CHFR-224ENST00000545046 HIGD1CA8MV81 97 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 HLA-DQA1P01909 254 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 OR4B1Q8NGF8 309 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 OR5R1Q8NH85 324 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 HIST1H2BLQ99880 126 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 A0A0G2JLM5 398 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 CENPEQ02224 2701 aa12.83□□□□□ -0.36
CHFR-224ENST00000545046 IGHV3-66A0A0C4DH42 116 aa12.82□□□□□ -0.36
CHFR-224ENST00000545046 FBLL1A6NHQ2 334 aaKnown RBP12.82□□□□□ -0.36
CHFR-224ENST00000545046 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
CHFR-224ENST00000545046 CRISP2P16562 243 aa12.82□□□□□ -0.36
CHFR-224ENST00000545046 PRSS57Q6UWY2 283 aa12.82□□□□□ -0.36
CHFR-224ENST00000545046 WIPF2Q8TF74 440 aaPredicted RBP12.82□□□□□ -0.36
CHFR-224ENST00000545046 ZC2HC1AQ96GY0 325 aa12.82□□□□□ -0.36
CHFR-224ENST00000545046 PACRGQ96M98 296 aaPredicted RBP12.82□□□□□ -0.36
CHFR-224ENST00000545046 GFRA4Q9GZZ7 299 aa12.82□□□□□ -0.36
CHFR-224ENST00000545046 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.81□□□□□ -0.36
CHFR-224ENST00000545046 PCP4L1A6NKN8 68 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 NPIPB6E9PJ23 425 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 CHEK1O14757 476 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 FSHBP01225 129 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 IGLV1-40P01703 118 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 PRB4P10163 310 aaPredicted RBP12.81□□□□□ -0.36
CHFR-224ENST00000545046 SLC50A1Q9BRV3 221 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 ZNF580Q9UK33 172 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 U3KQE9 123 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 POLQO75417 2590 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 IGHV3OR16-13A0A075B7E8 117 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 IGHV3-74A0A0B4J1X5 117 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 NDUFA4O00483 81 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 APOHP02749 345 aaPredicted RBP12.81□□□□□ -0.36
CHFR-224ENST00000545046 CYB5R2Q6BCY4 276 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 C9orf139Q6ZV77 190 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 KLK15Q9H2R5 256 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 NIT2Q9NQR4 276 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 CSPG4Q6UVK1 2322 aa12.81□□□□□ -0.36
CHFR-224ENST00000545046 ZFHX3Q15911 3703 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms