RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 OR10P1Q8NGE3 313 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 LINC00588Q9Y4M8 146 aa8.97□□□□□ -0.97
USP28-212ENST00000544750 IGSF23A1L1A6 192 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 FAM24AA6NFZ4 105 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 GOSR2O14653 212 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 PSMB3P49720 205 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 H2BFSP57053 126 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 S100A10P60903 97 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 PSG9Q00887 426 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 SPATA31B1PQ5VZV4 182 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 OR4B1Q8NGF8 309 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 C17orf77Q96MU5 243 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 KRTAP1-5Q9BYS1 174 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 NPVFQ9HCQ7 196 aa8.96□□□□□ -0.98
USP28-212ENST00000544750 LYRM2Q9NU23 88 aaPredicted RBP8.96□□□□□ -0.98
USP28-212ENST00000544750 A0A0J9YX75 114 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 F6UB75 175 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 L7N2F9 121 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 CFDP00746 253 aaPredicted RBP8.95□□□□□ -0.98
USP28-212ENST00000544750 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
USP28-212ENST00000544750 PLP1P60201 277 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 VAMP2P63027 116 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 C1orf194Q5T5A4 169 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 FAM78BQ5VT40 261 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 AMTNQ6UX39 209 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 BPIFCQ8NFQ6 507 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 LINC00052Q96N35 136 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 GGACTQ9BVM4 153 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 MGAT4CQ9UBM8 478 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 SLC45A2Q9UMX9 530 aa8.95□□□□□ -0.98
USP28-212ENST00000544750 PLAC8L1A1L4L8 177 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 ZNF98A6NK75 572 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 LYRM9A8MSI8 78 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 H0YIZ8 118 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 H3BRN7 92 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 CST7O76096 145 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 PRM2P04554 102 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 ORM2P19652 201 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 BTF3P20290 206 aaKnown RBP8.94□□□□□ -0.98
USP28-212ENST00000544750 ID1P41134 155 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 BCAP31P51572 246 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 CAV2P51636 162 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 SLC38A11Q08AI6 406 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 VWC2Q2TAL6 325 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 TEPPQ6URK8 271 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 TMEM252Q8N6L7 170 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 MGST2Q99735 147 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 NMES1Q9C002 83 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 SLC25A32Q9H2D1 315 aa8.94□□□□□ -0.98
USP28-212ENST00000544750 EPM2AB3EWF7 344 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 AGPAT2O15120 278 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 CRXO43186 299 aaPredicted RBP8.93□□□□□ -0.98
USP28-212ENST00000544750 LINC00869P0C866 280 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 PVALBP20472 110 aaPredicted RBP8.93□□□□□ -0.98
USP28-212ENST00000544750 CCL18P55774 89 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 SELENOTP62341 195 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 PATE2Q6UY27 113 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 OR1B1Q8NGR6 318 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 IGF2BP2-AS1Q96M15 143 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 OR5AC2Q9NZP5 309 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 DOK5Q9P104 306 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 PFDN2Q9UHV9 154 aa8.93□□□□□ -0.98
USP28-212ENST00000544750 FLG2Q5D862 2391 aaPredicted RBP8.92□□□□□ -0.98
USP28-212ENST00000544750 ISLRO14498 428 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 NUDT3O95989 172 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 PTTG1O95997 202 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 TSPOP30536 169 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 SULT1A1P50225 295 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 OR8I2Q8N0Y5 310 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 RNF141Q8WVD5 230 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 PPP1R14BQ96C90 147 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 C20orf173Q96LM9 149 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 UHRF2Q96PU4 802 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 SHANK2-AS3Q9BTD1 123 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 TMEM147Q9BVK8 224 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 SLC25A39Q9BZJ4 359 aaPredicted RBP8.92□□□□□ -0.98
USP28-212ENST00000544750 SLC25A22Q9H936 323 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 WDR83OSQ9Y284 106 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 ALG5Q9Y673 324 aa8.92□□□□□ -0.98
USP28-212ENST00000544750 ZNF705GA8MUZ8 300 aaPredicted RBP8.91□□□□□ -0.98
USP28-212ENST00000544750 F5H768 121 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 INAFM2P0DMQ5 153 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 LRRC37A5PQ49AS3 106 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 EBLN2Q6P2I7 272 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 SSX7Q7RTT5 188 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 ZNF546Q86UE3 836 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 PPP1R1CQ8WVI7 109 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 Q9H3A6 140 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 Q9H8V8 135 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 UQCC1Q9NVA1 299 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 HIGD1AQ9Y241 93 aa8.91□□□□□ -0.98
USP28-212ENST00000544750 UBE2L5PA0A1B0GUS4 154 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 SSNA1O43805 119 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 HYPMO75409 117 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 ATP5G1P05496 136 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 DEFB130BP0DP73 79 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 DEFB130AP0DP74 79 aa8.9□□□□□ -0.98
USP28-212ENST00000544750 S100A11P31949 105 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms