RNA–Protein interactions for RNA: ENST00000544425.2

SPDEF-202, Transcript of SAM pointed domain containing ETS transcription factor, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SPDEF, Length 1,866 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEF-202ENST00000544425 ZNF320A2RRD8 509 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 HIST2H2BCQ6DN03 193 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 TEX29Q8N6K0 151 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 RPH3ALQ9UNE2 315 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 SMAD5-AS1Q9Y6J3 95 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 U3KQE9 123 aa12.39□□□□□ -0.43
SPDEF-202ENST00000544425 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.43
SPDEF-202ENST00000544425 TMEM89A2RUT3 159 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 IGLV2-11P01706 119 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 TMEM75Q8N9X5 138 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 NHLRC2Q8NBF2 726 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 FRZBQ92765 325 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 DOPEY2Q9Y3R5 2298 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 PTPN13Q12923 2485 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 A0A087X0K7 114 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 SERTM2A0A1B0GWG4 89 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 K7EQM0 130 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 TRGC1P0CF51 173 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 ARL3P36405 182 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 RPL15P61313 204 aaKnown RBP12.38□□□□□ -0.43
SPDEF-202ENST00000544425 METTL26Q96S19 204 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 KLK15Q9H2R5 256 aa12.38□□□□□ -0.43
SPDEF-202ENST00000544425 ANKRD17O75179 2603 aaKnown RBP12.37□□□□□ -0.43
SPDEF-202ENST00000544425 DIRC3C9JPN6 131 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 PF4V1P10720 104 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 CDX1P47902 265 aaPredicted RBP12.37□□□□□ -0.43
SPDEF-202ENST00000544425 GOLT1AQ6ZVE7 132 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 TMEM183AQ8IXX5 376 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 WFDC11Q8NEX6 87 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 NUDT10Q8NFP7 164 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 NUDT11Q96G61 164 aa12.37□□□□□ -0.43
SPDEF-202ENST00000544425 SMIM27A0A1W2PRY6 76 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 ZNF705GA8MUZ8 300 aaPredicted RBP12.36□□□□□ -0.43
SPDEF-202ENST00000544425 IGHG4P01861 327 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 RPL19P84098 196 aaKnown RBP12.36□□□□□ -0.43
SPDEF-202ENST00000544425 ACTL10Q5JWF8 245 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 SGK494Q96LW2 274 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 ZNF492Q9P255 531 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 ZFP30Q9Y2G7 519 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 IGHV3OR16-8A0A075B7F1 116 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 NDUFA4O00483 81 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 GATCO43716 136 aaKnown RBP12.36□□□□□ -0.43
SPDEF-202ENST00000544425 CSN1S1P47710 185 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 FAM209BQ5JX69 171 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 Q86TA4 180 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 GRAMD2BQ96HH9 432 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 SERTAD4Q9NUC0 356 aa12.36□□□□□ -0.43
SPDEF-202ENST00000544425 ZFHX3Q15911 3703 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 NAV2Q8IVL1 2488 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 PSMB8P28062 276 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 NDUFA6P56556 154 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 PSG3Q16557 428 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 FOXC2Q99958 501 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 PRSS22Q9GZN4 317 aa12.35□□□□□ -0.43
SPDEF-202ENST00000544425 FBLL1A6NHQ2 334 aaKnown RBP12.34□□□□□ -0.43
SPDEF-202ENST00000544425 CIARTQ8N365 385 aaPredicted RBP12.34□□□□□ -0.43
SPDEF-202ENST00000544425 OR4X2Q8NGF9 303 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 ZNF331Q9NQX6 463 aaPredicted RBP12.34□□□□□ -0.43
SPDEF-202ENST00000544425 POLQO75417 2590 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 CELSR1Q9NYQ6 3014 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 CENPEQ02224 2701 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 TRAV8-1A0A0A6YYK1 113 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 C19orf71A6NCJ1 209 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 ZNF785A8K8V0 405 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 M0R3E3 92 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 HOXA3O43365 443 aaPredicted RBP12.34□□□□□ -0.43
SPDEF-202ENST00000544425 HIST3H2BBQ8N257 126 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 GSN-AS1Q9NRJ2 163 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 PSG8Q9UQ74 426 aa12.34□□□□□ -0.43
SPDEF-202ENST00000544425 CR1P17927 2039 aa12.33□□□□□ -0.43
SPDEF-202ENST00000544425 GCN1Q92616 2671 aaKnown RBP12.33□□□□□ -0.44
SPDEF-202ENST00000544425 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
SPDEF-202ENST00000544425 TRBV12-3P01733 135 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 APOHP02749 345 aaPredicted RBP12.33□□□□□ -0.44
SPDEF-202ENST00000544425 COX19Q49B96 90 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 CT83Q5H943 113 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 GFI1BQ5VTD9 330 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 PRR27Q6MZM9 219 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 PRNTQ86SH4 94 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 NPFFR1Q9GZQ6 430 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 NIT2Q9NQR4 276 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 TRAPPC1Q9Y5R8 145 aa12.33□□□□□ -0.44
SPDEF-202ENST00000544425 C16orf54Q6UWD8 224 aa12.32□□□□□ -0.44
SPDEF-202ENST00000544425 SLC50A1Q9BRV3 221 aa12.32□□□□□ -0.44
SPDEF-202ENST00000544425 APCP25054 2843 aa12.32□□□□□ -0.44
SPDEF-202ENST00000544425 IZUMO1RA6ND01 250 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 IGHV3-11P01762 117 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 TMEM95Q3KNT9 176 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 PYY3Q5JQD4 70 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 LINC00322Q6ZN03 302 aaPredicted RBP12.31□□□□□ -0.44
SPDEF-202ENST00000544425 TSKUQ8WUA8 353 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
SPDEF-202ENST00000544425 NPIPB6E9PJ23 425 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 COX8CQ7Z4L0 72 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 TMEM86BQ8N661 226 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 GNB1LQ9BYB4 327 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 ZNF702PQ9H963 129 aa12.31□□□□□ -0.44
SPDEF-202ENST00000544425 PEF1Q9UBV8 284 aaKnown RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms