RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 FRMD6-AS1P0C7T7 363 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 PYYP10082 97 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 SPP1P10451 314 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 PSMB3P49720 205 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 EIF5AP63241 154 aaKnown RBP10.11□□□□□ -0.79
SP140-213ENST00000543928 TMEM41BQ5BJD5 291 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 LINC00052Q96N35 136 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 CITED4Q96RK1 184 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 HRH4Q9H3N8 390 aa10.11□□□□□ -0.79
SP140-213ENST00000543928 TRAV8-2A0A0B4J237 113 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 OR7C2O60412 319 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 TPT1P13693 172 aaKnown RBP10.1□□□□□ -0.79
SP140-213ENST00000543928 CDC34P49427 236 aaPredicted RBP10.1□□□□□ -0.79
SP140-213ENST00000543928 NKX2-5P52952 324 aaPredicted RBP10.1□□□□□ -0.79
SP140-213ENST00000543928 TAS2R45P59539 299 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 KHDC3LQ587J8 217 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 C4orf48Q5BLP8 95 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 AKR1C8PQ5T2L2 129 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 IGFL4Q6B9Z1 124 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 LCN15Q6UWW0 184 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 BAP18Q8IXM2 172 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 RPP25LQ8N5L8 163 aaKnown RBP10.1□□□□□ -0.79
SP140-213ENST00000543928 LRRC20Q8TCA0 184 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 PAXXQ9BUH6 204 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 OR51M1Q9H341 326 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 RPRMQ9NS64 109 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 ZNF586Q9NXT0 402 aa10.1□□□□□ -0.79
SP140-213ENST00000543928 RBMY1BA6NDE4 496 aaKnown RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 RBMY1EA6NEQ0 496 aaKnown RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 SLC17A3O00476 420 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 HMGB3O15347 200 aaKnown RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 OR10J4P0C629 311 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 RBMY1DP0C7P1 496 aaKnown RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 HIST1H1EP10412 219 aaKnown RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 GUK1Q16774 197 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 RNF182Q8N6D2 247 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 STOML3Q8TAV4 291 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 RAB24Q969Q5 203 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 ZNF503Q96F45 646 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 C20orf173Q96LM9 149 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 SLC50A1Q9BRV3 221 aa10.09□□□□□ -0.79
SP140-213ENST00000543928 ACTR3CQ9C0K3 210 aaPredicted RBP10.09□□□□□ -0.79
SP140-213ENST00000543928 KNCNA6PVL3 124 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 SEC11BP0C7V7 166 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 C4BPBP20851 252 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 BLNKQ8WV28 456 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 RNF141Q8WVD5 230 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 FXYD5Q96DB9 178 aa10.08□□□□□ -0.8
SP140-213ENST00000543928 SAT2Q96F10 170 aaPredicted RBP10.08□□□□□ -0.8
SP140-213ENST00000543928 ZNF331Q9NQX6 463 aaPredicted RBP10.08□□□□□ -0.8
SP140-213ENST00000543928 TRBV19A0A075B6N1 114 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 LOC102724200A0A096LPH7 203 aaPredicted RBP10.07□□□□□ -0.8
SP140-213ENST00000543928 NBEAP1P0C6P0 100 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 STAG3L2P0CL84 134 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 STAG3L3P0CL85 134 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 RPL35AP18077 110 aaKnown RBP10.07□□□□□ -0.8
SP140-213ENST00000543928 HLA-DMBP28068 263 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 DEFB1P60022 68 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 UBE2L3P68036 154 aaKnown RBP10.07□□□□□ -0.8
SP140-213ENST00000543928 ACTL10Q5JWF8 245 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 LINC00322Q6ZN03 302 aaPredicted RBP10.07□□□□□ -0.8
SP140-213ENST00000543928 PQLC2Q6ZP29 291 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 SSX7Q7RTT5 188 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 SLC51BQ86UW2 128 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 TMED6Q8WW62 240 aa10.07□□□□□ -0.8
SP140-213ENST00000543928 AGRNO00468 2067 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 CTXND1A0A1B0GTU2 59 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 ZNF253O75346 499 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 NDUFB4O95168 129 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 ARL14EPLP0DKL9 152 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 PDE6HQ13956 83 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 ZNF726P1Q15940 193 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 PSG3Q16557 428 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 ZNF738Q8NE65 137 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 ASCL2Q99929 193 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 B9D2Q9BPU9 175 aa10.06□□□□□ -0.8
SP140-213ENST00000543928 UMAD1C9J7I0 102 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 F6UB75 175 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 GDF5OSQ5U4N7 250 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 EIF5AL1Q6IS14 154 aaKnown RBP10.05□□□□□ -0.8
SP140-213ENST00000543928 FOXI2Q6ZQN5 318 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 STHQ8IWL8 128 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 PHYHIPLQ96FC7 376 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 SAV1Q9H4B6 383 aaPredicted RBP10.05□□□□□ -0.8
SP140-213ENST00000543928 DNAH9Q9NYC9 4486 aa10.05□□□□□ -0.8
SP140-213ENST00000543928 PRB4P10163 310 aaPredicted RBP10.04□□□□□ -0.8
SP140-213ENST00000543928 HLA-DRB4P13762 266 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 FHITP49789 147 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 PSG9Q00887 426 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 HAGHQ16775 308 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 EBLN2Q6P2I7 272 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 TRPT1Q86TN4 253 aaKnown RBP10.04□□□□□ -0.8
SP140-213ENST00000543928 EXOC3-AS1Q8N2X6 119 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 RPUSD4Q96CM3 377 aaKnown RBP10.04□□□□□ -0.8
SP140-213ENST00000543928 CLEC5AQ9NY25 188 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 HLA-DRB4X5D2U9 266 aa10.04□□□□□ -0.8
SP140-213ENST00000543928 A0A0J9YX75 114 aa10.03□□□□□ -0.8
SP140-213ENST00000543928 ZNF705FA8MVS1 300 aaPredicted RBP10.03□□□□□ -0.8
SP140-213ENST00000543928 H3BMM0 161 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms