RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	NBEAP1	P0C6P0	100 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	DEFB131A	P59861	70 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	GUK1	Q16774	197 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	PSMG4	Q5JS54	123 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	FAM74A1	Q5RGS3	127 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	IGFL4	Q6B9Z1	124 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	ALKAL2	Q6UX46	152 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	DPPA3	Q6W0C5	159 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	PQLC2	Q6ZP29	291 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	DCANP1	Q8TF63	244 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	SFT2D1	Q8WV19	159 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	C17orf77	Q96MU5	243 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	HRH4	Q9H3N8	390 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545	ZNF586	Q9NXT0	402 aa		7.6	□□□□□ -1.19
CPSF7-221	ENST00000543545		A0A1B0GV50	99 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	MAP1LC3B2	A6NCE7	125 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	OR11H12	B2RN74	326 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	ISLR	O14498	428 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	H2AFB1	P0C5Y9	115 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	STAG3L2	P0CL84	134 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	STAG3L3	P0CL85	134 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	ARL14EPL	P0DKL9	152 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	IGLC2	P0DOY2	106 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	GCHFR	P30047	84 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	SULT1A2	P50226	295 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	FGF8	P55075	233 aa	Predicted RBP	7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	ZNF726P1	Q15940	193 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	KPRP	Q5T749	579 aa	Predicted RBP	7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	FAM24B	Q8N5W8	94 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	FXYD5	Q96DB9	178 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	PHYHIPL	Q96FC7	376 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	MAP1LC3B	Q9GZQ8	125 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	TUBA4B	Q9H853	241 aa		7.59	□□□□□ -1.19
CPSF7-221	ENST00000543545	TRBV19	A0A075B6N1	114 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF705E	A8MWA4	302 aa	Predicted RBP	7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	PSMB3	P49720	205 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	RAN	P62826	216 aa	Known RBP	7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	PSG9	Q00887	426 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	DEFB121	Q5J5C9	76 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	SSX7	Q7RTT5	188 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	APRG1	Q8IVJ8	170 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	DEFB125	Q8N687	156 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF738	Q8NE65	137 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF503	Q96F45	646 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	SLC50A1	Q9BRV3	221 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	MAP6D1	Q9H9H5	199 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	TMEM167B	Q9NRX6	74 aa		7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	7.58	□□□□□ -1.2
CPSF7-221	ENST00000543545	TRAV8-2	A0A0B4J237	113 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	TEX46	H3BTG2	121 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	SLC17A3	O00476	420 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	SOCS3	O14543	225 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	HLA-DMB	P28068	263 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	PDE6H	Q13956	83 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	ODF3L2	Q3SX64	289 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	RNF182	Q8N6D2	247 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	MBD3L1	Q8WWY6	194 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	WFDC10A	Q9H1F0	79 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	TMPRSS5	Q9H3S3	457 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	AAMDC	Q9H7C9	122 aa		7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF331	Q9NQX6	463 aa	Predicted RBP	7.57	□□□□□ -1.2
CPSF7-221	ENST00000543545	KNCN	A6PVL3	124 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	NDUFB4	O95168	129 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	IFNA7	P01567	189 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	UBE2G2	P60604	165 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	BLOC1S1	P78537	153 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	ICAM4	Q14773	271 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF124	Q15973	351 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	PSG3	Q16557	428 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	ACTL10	Q5JWF8	245 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	EBLN2	Q6P2I7	272 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545		Q8N1Y9	231 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	EXOC3-AS1	Q8N2X6	119 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	SAT2	Q96F10	170 aa	Predicted RBP	7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	C20orf173	Q96LM9	149 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	SRD5A3	Q9H8P0	318 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	CLEC5A	Q9NY25	188 aa		7.56	□□□□□ -1.2
CPSF7-221	ENST00000543545	PGP	A6NDG6	321 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF705F	A8MVS1	300 aa	Predicted RBP	7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF253	O75346	499 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	HBE1	P02100	147 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	PRB4	P10163	310 aa	Predicted RBP	7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	CSN1S1	P47710	185 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	DEFB1	P60022	68 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	DEFA6	Q01524	100 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	TEX261	Q6UWH6	196 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	STH	Q8IWL8	128 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	ZNF680	Q8NEM1	530 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	CMTM2	Q8TAZ6	248 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	RPUSD4	Q96CM3	377 aa	Known RBP	7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	FAM110A	Q9BQ89	295 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545		Q9H3A6	140 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	C19orf73	Q9NVV2	129 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	PRELID1	Q9Y255	219 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	PKD1L1	Q8TDX9	2849 aa		7.55	□□□□□ -1.2
CPSF7-221	ENST00000543545	SORL1	Q92673	2214 aa		7.54	□□□□□ -1.2
CPSF7-221	ENST00000543545		K7EIL1	84 aa		7.54	□□□□□ -1.2
CPSF7-221	ENST00000543545	IGHV4-30-4	P0DP06	118 aa		7.54	□□□□□ -1.2
CPSF7-221	ENST00000543545	RPL35A	P18077	110 aa	Known RBP	7.54	□□□□□ -1.2
CPSF7-221	ENST00000543545	CST9LP1	Q5W188	147 aa		7.54	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms